Probe CUST_18262_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_18262_PI426222305 | JHI_St_60k_v1 | DMT400055002 | GGGAATAGTCCTATTAAAAAATTCCCTTCTTCTGCTTCTCCAACTGTTTCACTTCATTCT |
All Microarray Probes Designed to Gene DMG400021345
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_18346_PI426222305 | JHI_St_60k_v1 | DMT400055003 | ATGCAGGTACAAAAATGTATCATAGTTAGGTTCTCTTTTCACCACTTTTTCCCCTTTTTC |
| CUST_18262_PI426222305 | JHI_St_60k_v1 | DMT400055002 | GGGAATAGTCCTATTAAAAAATTCCCTTCTTCTGCTTCTCCAACTGTTTCACTTCATTCT |
Microarray Signals from CUST_18262_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 24.7427 | 3.80798 | 1.17376 | 0.158759 |
| ABA 1h | 16.9376 | 2.95129 | 0.898909 | 0.230603 |
| ACC 1h | 25.7758 | 7.68563 | 1.07466 | 0.347088 |
| BABA 1h | 11.5424 | 3.53192 | 0.519978 | 0.184836 |
| Chitin 1h | 11.5659 | 3.65982 | 0.564585 | 0.22133 |
| Epi 1h | 14.7601 | 2.98347 | 0.798997 | 0.178778 |
| SA 1h | 17.3824 | 3.08958 | 0.812027 | 0.148478 |
| Me-JA 1h | 10.6473 | 3.02812 | 0.615125 | 0.188029 |
| Control 6h | 36.8017 | 8.09949 | 1.67919 | 0.281805 |
| ABA 6h | 12.5634 | 3.78427 | 0.524825 | 0.200849 |
| ACC 6h | 15.9911 | 9.27564 | 0.483069 | 0.250445 |
| BABA 6h | 28.4423 | 3.72255 | 1.22744 | 0.161054 |
| Chitin 6h | 33.5479 | 5.92217 | 1.48317 | 0.229898 |
| Epi 6h | 30.6414 | 11.2305 | 1.04796 | 0.855967 |
| SA 6h | 21.7279 | 5.57747 | 0.982188 | 0.386796 |
| Me-JA 6h | 16.0431 | 10.3085 | 0.517707 | 0.37096 |
Source Transcript PGSC0003DMT400055002 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G12900.1 | +1 | 0.0 | 536 | 312/592 (53%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12330.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:4072151-4074445 REVERSE LENGTH=562 |