Probe CUST_1316_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1316_PI426222305 | JHI_St_60k_v1 | DMT400003465 | CCCTATTTCATAACCCCATTGTTTGACGACGTCAACTCTTTTATGGAATGTCTTATAAAA |
All Microarray Probes Designed to Gene DMG400001369
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1048_PI426222305 | JHI_St_60k_v1 | DMT400003464 | ACATGGCTAATGGTACCCTCCGTGATCACTTGTACAATACTGACAATGCTCCTCTTCCAT |
| CUST_999_PI426222305 | JHI_St_60k_v1 | DMT400003463 | GTCAACATCACTTACACTACTGAAACCCCGCCTTAAATGTTATTCATTGCTCTGATTTCC |
| CUST_1316_PI426222305 | JHI_St_60k_v1 | DMT400003465 | CCCTATTTCATAACCCCATTGTTTGACGACGTCAACTCTTTTATGGAATGTCTTATAAAA |
Microarray Signals from CUST_1316_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 859.441 | 103.132 | 1.21245 | 0.0787083 |
| ABA 1h | 455.609 | 26.4995 | 0.735677 | 0.0677448 |
| ACC 1h | 743.233 | 206.711 | 0.929981 | 0.267632 |
| BABA 1h | 705.595 | 121.316 | 1.01514 | 0.0947294 |
| Chitin 1h | 530.604 | 48.9767 | 0.836142 | 0.0485218 |
| Epi 1h | 567.994 | 56.8135 | 0.928656 | 0.091097 |
| SA 1h | 1121.96 | 109.107 | 1.54605 | 0.102887 |
| Me-JA 1h | 257.341 | 26.3385 | 0.446292 | 0.0263465 |
| Control 6h | 839.443 | 192.374 | 1.12738 | 0.183161 |
| ABA 6h | 283.169 | 71.7174 | 0.355953 | 0.076553 |
| ACC 6h | 747.019 | 43.3314 | 0.930531 | 0.109726 |
| BABA 6h | 836.39 | 57.0374 | 1.06336 | 0.0615672 |
| Chitin 6h | 684.186 | 39.7776 | 0.916375 | 0.0777432 |
| Epi 6h | 902.021 | 132.82 | 1.12078 | 0.190782 |
| SA 6h | 768.891 | 101.442 | 1.0909 | 0.0631927 |
| Me-JA 6h | 748.716 | 158.248 | 1.02472 | 0.142758 |
Source Transcript PGSC0003DMT400003465 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g089090.2 | +2 | 1e-93 | 298 | 156/246 (63%) | genomic_reference:SL2.50ch02 gene_region:45568082-45571263 transcript_region:SL2.50ch02:45568082..45571263+ go_terms:GO:0004672 functional_description:Pto-like, Serine/threonine kinase protein, resistance protein |
| TAIR PP10 | AT3G51550.1 | +2 | 9e-72 | 239 | 132/246 (54%) | Malectin/receptor-like protein kinase family protein | chr3:19117877-19120564 REVERSE LENGTH=895 |