Probe CUST_1188_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_1188_PI426222305 | JHI_St_60k_v1 | DMT400052107 | GATAGAGGAGAAACCCGTTTTCTTTACTTCCCTCACTCTTAACAGAAAGAAACCAAAAAA |
All Microarray Probes Designed to Gene DMG400020226
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_831_PI426222305 | JHI_St_60k_v1 | DMT400052108 | AATCATTTAGTATTGGTGTAATTGGGCGTTGCCTCCAGGGTCAGGAGCTGATTAAGCGAA |
| CUST_1188_PI426222305 | JHI_St_60k_v1 | DMT400052107 | GATAGAGGAGAAACCCGTTTTCTTTACTTCCCTCACTCTTAACAGAAAGAAACCAAAAAA |
Microarray Signals from CUST_1188_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 29.7091 | 4.08239 | 0.839398 | 0.118009 |
| ABA 1h | 46.3361 | 7.01148 | 1.46161 | 0.187795 |
| ACC 1h | 37.2838 | 4.51349 | 1.02294 | 0.133065 |
| BABA 1h | 37.5622 | 4.55078 | 1.11116 | 0.135725 |
| Chitin 1h | 32.8312 | 10.423 | 0.912295 | 0.512687 |
| Epi 1h | 28.2706 | 4.04414 | 0.918685 | 0.138826 |
| SA 1h | 33.4955 | 4.87265 | 0.914162 | 0.191093 |
| Me-JA 1h | 21.4064 | 5.48685 | 0.706488 | 0.237138 |
| Control 6h | 34.9351 | 6.72065 | 0.962922 | 0.130998 |
| ABA 6h | 43.481 | 7.45854 | 1.13817 | 0.189356 |
| ACC 6h | 33.2559 | 9.89882 | 0.729903 | 0.290729 |
| BABA 6h | 42.4441 | 4.93815 | 1.08349 | 0.125526 |
| Chitin 6h | 34.4078 | 6.53275 | 0.893721 | 0.146626 |
| Epi 6h | 33.4395 | 7.90537 | 0.793568 | 0.228201 |
| SA 6h | 20.2119 | 4.23928 | 0.578886 | 0.127884 |
| Me-JA 6h | 31.4795 | 7.82573 | 0.841588 | 0.16752 |
Source Transcript PGSC0003DMT400052107 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g093880.2 | +1 | 0.0 | 777 | 432/506 (85%) | genomic_reference:SL2.50ch02 gene_region:49151330-49155789 transcript_region:SL2.50ch02:49151330..49155789- go_terms:GO:0005515,GO:0003677 functional_description:DNA-binding bromodomain-containing protein (AHRD V1 **-* D7MP02_ARALY); contains Interpro domain(s) IPR001487 Bromodomain |
| TAIR PP10 | AT3G27260.1 | +1 | 9e-90 | 301 | 211/485 (44%) | global transcription factor group E8 | chr3:10068411-10072403 FORWARD LENGTH=813 |