Probe CUST_831_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_831_PI426222305 | JHI_St_60k_v1 | DMT400052108 | AATCATTTAGTATTGGTGTAATTGGGCGTTGCCTCCAGGGTCAGGAGCTGATTAAGCGAA |
All Microarray Probes Designed to Gene DMG400020226
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_831_PI426222305 | JHI_St_60k_v1 | DMT400052108 | AATCATTTAGTATTGGTGTAATTGGGCGTTGCCTCCAGGGTCAGGAGCTGATTAAGCGAA |
| CUST_1188_PI426222305 | JHI_St_60k_v1 | DMT400052107 | GATAGAGGAGAAACCCGTTTTCTTTACTTCCCTCACTCTTAACAGAAAGAAACCAAAAAA |
Microarray Signals from CUST_831_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 355.212 | 56.9439 | 0.882951 | 0.0801864 |
| ABA 1h | 809.386 | 68.8943 | 2.31298 | 0.155597 |
| ACC 1h | 441.597 | 88.9867 | 1.04355 | 0.163035 |
| BABA 1h | 374.552 | 63.8871 | 0.961519 | 0.09523 |
| Chitin 1h | 300.938 | 27.9885 | 0.845281 | 0.120937 |
| Epi 1h | 298.25 | 27.3469 | 0.869862 | 0.0747011 |
| SA 1h | 576.674 | 33.5008 | 1.42881 | 0.0829375 |
| Me-JA 1h | 209.532 | 23.4613 | 0.645814 | 0.055329 |
| Control 6h | 389.302 | 76.6777 | 0.943991 | 0.127156 |
| ABA 6h | 646.248 | 122.696 | 1.48458 | 0.267981 |
| ACC 6h | 529.393 | 54.7744 | 1.162 | 0.143101 |
| BABA 6h | 514.258 | 46.5775 | 1.16046 | 0.067707 |
| Chitin 6h | 368.019 | 21.704 | 0.880337 | 0.0519031 |
| Epi 6h | 432.534 | 49.5242 | 0.965059 | 0.113884 |
| SA 6h | 291.194 | 65.6372 | 0.703283 | 0.105152 |
| Me-JA 6h | 337.698 | 82.6988 | 0.814772 | 0.131357 |
Source Transcript PGSC0003DMT400052108 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc02g093880.2 | +1 | 0.0 | 1113 | 679/732 (93%) | genomic_reference:SL2.50ch02 gene_region:49151330-49155789 transcript_region:SL2.50ch02:49151330..49155789- go_terms:GO:0005515,GO:0003677 functional_description:DNA-binding bromodomain-containing protein (AHRD V1 **-* D7MP02_ARALY); contains Interpro domain(s) IPR001487 Bromodomain |
| TAIR PP10 | AT3G27260.1 | +1 | 9e-109 | 359 | 257/575 (45%) | global transcription factor group E8 | chr3:10068411-10072403 FORWARD LENGTH=813 |