Probe CUST_11530_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11530_PI426222305 | JHI_St_60k_v1 | DMT400052283 | TTCATGGCGTCCTGTTAGACATACAATTGATAATTGACAATACAACTAGTTGCTGAGGAG |
All Microarray Probes Designed to Gene DMG400020288
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11530_PI426222305 | JHI_St_60k_v1 | DMT400052283 | TTCATGGCGTCCTGTTAGACATACAATTGATAATTGACAATACAACTAGTTGCTGAGGAG |
| CUST_11528_PI426222305 | JHI_St_60k_v1 | DMT400052282 | ATCATTTAATGACAACAAGTGAGGGACCAATATTCAGTGGCATCCAGTCTCCTAACAGTG |
Microarray Signals from CUST_11530_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 80.1622 | 14.1823 | 1.44201 | 0.192754 |
| ABA 1h | 42.5869 | 4.80259 | 0.884893 | 0.0840532 |
| ACC 1h | 53.2237 | 10.0869 | 0.929157 | 0.12792 |
| BABA 1h | 40.4288 | 9.22287 | 0.734476 | 0.117777 |
| Chitin 1h | 43.2255 | 5.20746 | 0.88314 | 0.15291 |
| Epi 1h | 46.3691 | 4.13488 | 0.997975 | 0.0892402 |
| SA 1h | 46.4016 | 6.75922 | 0.822692 | 0.126391 |
| Me-JA 1h | 45.313 | 9.86363 | 0.989555 | 0.12494 |
| Control 6h | 80.7288 | 19.1877 | 1.42013 | 0.26082 |
| ABA 6h | 30.2856 | 3.92587 | 0.530244 | 0.0689467 |
| ACC 6h | 59.0155 | 12.9954 | 0.917216 | 0.0829539 |
| BABA 6h | 73.6458 | 21.4468 | 1.13078 | 0.312194 |
| Chitin 6h | 99.8032 | 6.88618 | 1.74293 | 0.120179 |
| Epi 6h | 67.9763 | 6.97657 | 1.11111 | 0.206116 |
| SA 6h | 64.3921 | 6.84098 | 1.19957 | 0.0974226 |
| Me-JA 6h | 59.8411 | 24.9439 | 0.878531 | 0.465072 |
Source Transcript PGSC0003DMT400052283 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G04039.3 | +1 | 8e-19 | 87 | 43/57 (75%) | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:1333464-1334457 FORWARD LENGTH=206 |