Probe CUST_11528_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11528_PI426222305 | JHI_St_60k_v1 | DMT400052282 | ATCATTTAATGACAACAAGTGAGGGACCAATATTCAGTGGCATCCAGTCTCCTAACAGTG |
All Microarray Probes Designed to Gene DMG400020288
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11530_PI426222305 | JHI_St_60k_v1 | DMT400052283 | TTCATGGCGTCCTGTTAGACATACAATTGATAATTGACAATACAACTAGTTGCTGAGGAG |
| CUST_11528_PI426222305 | JHI_St_60k_v1 | DMT400052282 | ATCATTTAATGACAACAAGTGAGGGACCAATATTCAGTGGCATCCAGTCTCCTAACAGTG |
Microarray Signals from CUST_11528_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 6.09811 | 3.53742 | 0.814309 | 0.472068 |
| ABA 1h | 5.97772 | 3.4708 | 0.900534 | 0.521498 |
| ACC 1h | 7.4467 | 3.95887 | 0.957566 | 0.515208 |
| BABA 1h | 8.4426 | 3.80466 | 1.14866 | 0.538846 |
| Chitin 1h | 7.66429 | 3.64627 | 1.09305 | 0.554108 |
| Epi 1h | 6.13378 | 3.55839 | 0.945378 | 0.547505 |
| SA 1h | 9.6275 | 3.6028 | 1.18691 | 0.494524 |
| Me-JA 1h | 12.9205 | 5.1837 | 1.81035 | 0.957198 |
| Control 6h | 6.43466 | 3.73331 | 0.857819 | 0.497654 |
| ABA 6h | 6.6236 | 3.84562 | 0.831171 | 0.481792 |
| ACC 6h | 8.64458 | 4.58247 | 0.989363 | 0.512747 |
| BABA 6h | 9.09682 | 4.17713 | 1.02432 | 0.513326 |
| Chitin 6h | 14.5812 | 4.12945 | 1.81747 | 0.521263 |
| Epi 6h | 9.37858 | 4.33957 | 1.07902 | 0.513904 |
| SA 6h | 7.68697 | 3.87047 | 1.02285 | 0.531307 |
| Me-JA 6h | 8.11964 | 3.61015 | 1.06611 | 0.497456 |
Source Transcript PGSC0003DMT400052282 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G04039.3 | +3 | 5e-22 | 96 | 59/108 (55%) | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 38 Blast hits to 38 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:1333464-1334457 FORWARD LENGTH=206 |