Probe CUST_10542_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_10542_PI426222305 | JHI_St_60k_v1 | DMT400031706 | AAATACACTTGACGCCAGATTAGAAGTTGTGTTCCGTAAGAAGCTACCAGAGGATGCTTC |
All Microarray Probes Designed to Gene DMG400012166
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_10601_PI426222305 | JHI_St_60k_v1 | DMT400031707 | AATGGGGGTATGTTGTCTTGCACGAAGAGGGATATCTATGAATTGTCATGTACGAGCCAG |
| CUST_10530_PI426222305 | JHI_St_60k_v1 | DMT400031712 | CTCAAAGTGGTGCTGTCAGAATAGAATGTTGATAGAATTTTCACTAAGAAATGAGCAATC |
| CUST_10542_PI426222305 | JHI_St_60k_v1 | DMT400031706 | AAATACACTTGACGCCAGATTAGAAGTTGTGTTCCGTAAGAAGCTACCAGAGGATGCTTC |
| CUST_10878_PI426222305 | JHI_St_60k_v1 | DMT400031711 | CTCAAAGTGGTGCTGTCAGAATAGAATGTTGATAGAATTTTCACTAAGAAATGAGCAATC |
Microarray Signals from CUST_10542_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 10697.3 | 1452.39 | 1.06234 | 0.0873424 |
| ABA 1h | 8891 | 858.805 | 1.00574 | 0.0961751 |
| ACC 1h | 10525.3 | 1514.35 | 1.01176 | 0.083137 |
| BABA 1h | 9435.33 | 1425.42 | 0.96586 | 0.0707567 |
| Chitin 1h | 7840.54 | 577.128 | 0.876307 | 0.0505948 |
| Epi 1h | 8192.42 | 1057.85 | 0.938775 | 0.120465 |
| SA 1h | 10653.4 | 810.508 | 1.04139 | 0.0601257 |
| Me-JA 1h | 6719.14 | 465.609 | 0.827403 | 0.0477717 |
| Control 6h | 11983.8 | 2774.38 | 1.12854 | 0.210783 |
| ABA 6h | 11302.2 | 1629.55 | 1.05087 | 0.100946 |
| ACC 6h | 11335.3 | 1301.4 | 0.985663 | 0.0569082 |
| BABA 6h | 10735.4 | 620.406 | 0.968055 | 0.0558916 |
| Chitin 6h | 8752.69 | 627.637 | 0.826245 | 0.0477045 |
| Epi 6h | 10846.5 | 1007.62 | 0.9639 | 0.12093 |
| SA 6h | 9538.28 | 1915.93 | 0.927951 | 0.103668 |
| Me-JA 6h | 12368 | 1328.83 | 1.23999 | 0.0715913 |
Source Transcript PGSC0003DMT400031706 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT1G64200.1 | +1 | 2e-109 | 318 | 175/225 (78%) | vacuolar H+-ATPase subunit E isoform 3 | chr1:23828537-23830002 REVERSE LENGTH=237 |