Probe CUST_3092_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_3092_PI426222305 | JHI_St_60k_v1 | DMT400033257 | CCTTGATGGCATCATTAAATAGCCACCATTTTTACCCTAACAAGTTCTCAAGTAGAGTAT |
All Microarray Probes Designed to Gene DMG400012774
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2889_PI426222305 | JHI_St_60k_v1 | DMT400033260 | TTGGAGCCCTCTTCAACTTCAGAAAAAAGGCACCATTTTTCATTTTATCTAAGGATTCAA |
| CUST_3092_PI426222305 | JHI_St_60k_v1 | DMT400033257 | CCTTGATGGCATCATTAAATAGCCACCATTTTTACCCTAACAAGTTCTCAAGTAGAGTAT |
| CUST_3247_PI426222305 | JHI_St_60k_v1 | DMT400033259 | CCAACCCCTCTCATCAAAATGTTTCCTTTTGATACTAAATCCACCTCATTGGTATATATG |
Microarray Signals from CUST_3092_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 66.6323 | 9.1909 | 0.87174 | 0.0806171 |
| ABA 1h | 46.5524 | 17.1879 | 0.619841 | 0.181402 |
| ACC 1h | 84.1956 | 29.372 | 0.923249 | 0.378178 |
| BABA 1h | 65.0252 | 17.5354 | 0.82507 | 0.175751 |
| Chitin 1h | 39.3589 | 4.31466 | 0.580229 | 0.0647593 |
| Epi 1h | 47.9243 | 10.3223 | 0.703444 | 0.140605 |
| SA 1h | 95.0285 | 27.7075 | 1.12924 | 0.324278 |
| Me-JA 1h | 163.141 | 36.5285 | 2.53717 | 0.337652 |
| Control 6h | 121.552 | 47.6173 | 1.30712 | 0.597704 |
| ABA 6h | 77.4674 | 13.4171 | 0.941368 | 0.114124 |
| ACC 6h | 112.935 | 27.7173 | 1.24132 | 0.124681 |
| BABA 6h | 110.1 | 19.523 | 1.26674 | 0.187999 |
| Chitin 6h | 74.7627 | 6.08164 | 0.934693 | 0.0761163 |
| Epi 6h | 86.7156 | 29.8472 | 0.901385 | 0.412089 |
| SA 6h | 69.4044 | 21.7021 | 0.854481 | 0.209721 |
| Me-JA 6h | 318.375 | 27.9074 | 4.22462 | 0.249495 |
Source Transcript PGSC0003DMT400033257 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G60810.1 | +1 | 3e-74 | 226 | 111/151 (74%) | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1499 (InterPro:IPR010865); Has 444 Blast hits to 444 proteins in 143 species: Archae - 0; Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink). | chr3:22470579-22471756 FORWARD LENGTH=214 |