Probe CUST_13545_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_13545_PI426222305 | JHI_St_60k_v1 | DMT400017403 | ATCCGTCTATACGCTCATTATGCTTTGTAGATGGCAGAAAATAAGTGCTCCTGAGAGTAT |
All Microarray Probes Designed to Gene DMG400006768
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_13467_PI426222305 | JHI_St_60k_v1 | DMT400017404 | CATTTGGCTTGCATATGTTTTCTTATACTGTAGCAAAGCTGAAATCTTCCACGTTGCTAT |
| CUST_13545_PI426222305 | JHI_St_60k_v1 | DMT400017403 | ATCCGTCTATACGCTCATTATGCTTTGTAGATGGCAGAAAATAAGTGCTCCTGAGAGTAT |
| CUST_13552_PI426222305 | JHI_St_60k_v1 | DMT400017405 | GCCACACGCACTGACTCTAGATTTTGGTTTCACCTCTGAATATAAACGTGCAGATTGTGA |
| CUST_13450_PI426222305 | JHI_St_60k_v1 | DMT400017406 | CCACCCATGCCTTCATGTTCGTGTGTTACATAACAATTTATGTAAATTGTAATTAGGTCA |
Microarray Signals from CUST_13545_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 159.591 | 31.0026 | 1.6252 | 0.210225 |
| ABA 1h | 101.728 | 18.2992 | 1.18004 | 0.211249 |
| ACC 1h | 123.259 | 21.1723 | 1.22653 | 0.142652 |
| BABA 1h | 160.224 | 51.9346 | 1.53728 | 0.470177 |
| Chitin 1h | 150.169 | 9.40757 | 1.76017 | 0.109912 |
| Epi 1h | 121.332 | 7.83645 | 1.47842 | 0.0956262 |
| SA 1h | 128.024 | 21.0706 | 1.27811 | 0.178299 |
| Me-JA 1h | 197.598 | 42.1902 | 2.44956 | 0.30274 |
| Control 6h | 78.7955 | 21.9475 | 0.760328 | 0.170216 |
| ABA 6h | 53.4791 | 15.2707 | 0.474775 | 0.162348 |
| ACC 6h | 30.5191 | 4.84779 | 0.279488 | 0.0433772 |
| BABA 6h | 47.5691 | 4.97165 | 0.446103 | 0.0469855 |
| Chitin 6h | 44.5412 | 13.4908 | 0.387075 | 0.174672 |
| Epi 6h | 40.9058 | 14.3886 | 0.341186 | 0.134964 |
| SA 6h | 32.7132 | 7.00533 | 0.33095 | 0.0516162 |
| Me-JA 6h | 118.11 | 19.4613 | 1.21643 | 0.120208 |
Source Transcript PGSC0003DMT400017403 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G13800.2 | +3 | 4e-98 | 315 | 150/242 (62%) | pheophytinase | chr5:4452063-4454141 REVERSE LENGTH=484 |