Microarray Probes on PGSC0003DMT400009051

Probe IDChipProbe Sequence
CUST_5415_PI426222305 JHI_St_60k_v1 CGGAACTTAACAATTTGGAGCTGATGAGCATGATATTCAACTGTAATGAAGTGTGTAAAT

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400009051

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Source Transcript PGSC0003DMT400009051 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT4G36500.1 +1 9e-13 63 44/112 (39%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:17226139-17226507 REVERSE LENGTH=122

Transcript Sequence (685 bp)

>PGSC0003DMT400009051 685 pgsc_dm_v3.4
GTTTTGTTTTCTTCATCTCTCAATTTCCTACTTCATTTTAAGCAGCCTATAATTCAAGAA
ATTTGGGTGTTTGTAACTTATACACCAAATAATTAAATCTAAGCCATGTTTAGAGCAATG
AGTACACGAAGGGACTACAGAGGATACGGAGTATTGAACAAGGAAGATGAGGAGGAGGCA
AGTGCTCCAATACTGGGAAAGCCAAAATTGAGCAGAAACAGAACAGTTCCTGCTGCTGCT
AAATTCTTTAGCTCTTCATCAAAGAAGGTCACATCCGAGGACAATTTTCGTGCAAGTGCT
CAGGTAAAAGAAGCGAAAAAAGCAAGCAAGATTCATCCGATATTTAGTCTATTCGAAACG
AAGAGGAAGAAGAAGGCAACTGCAAGACCTGAATTCTCGAGGTACATTCAGTATCTTAGA
GAGGGGGGTTTTGGTGATGTTTTGCAGACGACTACTTAATTCCTACAAAACCAACTTGGC
CGCAGTTAATTAGTGATTTAAAATATGTTATGCGTAAGTTAATTTGGATTTTGTGGTACA
GAATTTTTTATTTTATAAATTGGTTTACTATATATGGTCTTACGGAACTTAACAATTTGG
AGCTGATGAGCATGATATTCAACTGTAATGAAGTGTGTAAATATACGTCATAATGCAAAC
TTGTTTTATCTTATTTCTTCCGAAT