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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30281_PI390587928Hv_44K_v2AGGGTCTTGTCTCAAGCCAAAGTTTCCTAATTTTGAAAAGACTAGAATTAGTTGAGATAC440GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_4500.161613e-212089 - 21489758 / 60minus ABC12367 ABC14071 ABC17631
MLOCMLOC_4500.260293e-211957 - 20169758 / 60minus ABC12367 ABC14071 ABC17631
MLOCMLOC_4500.337163e-211857 - 19169758 / 60minus ABC12367
MLOCMLOC_4500.439393e-211713 - 17729758 / 60minus ABC12367
JLOC1JLOC1_2804.155362e-213360 - 34199758 / 60plus
Harvest21ABC350095183e-25441 - 50010060 / 60plus
Harvest35U35_389945183e-25441 - 50010060 / 60plus



Contig Sequence (518 bp)

>U35_38994 518 Hv_44K_v2
AATAAAATTACTAGAGGAACTGAGAAGATTTGAAGTGAGAAAAGAAACTAAGGGTTTTGA
GTTAAGTCAACTAGGAGAACTGACAGAGCTTGGAGGATCACTTGGCATTTATAATCTTGA
AAATGTGCAGAAAAAGGACGAGGCAGACGAACTAAAACTAATGAACAAAAACCACTTGCA
CAAGCTAACACTAGAATGGTCTTTTGATAGACCCATCAGGGATGCAGAACAAGAAAAAAA
TGTGATTGAAAGTCTTGTCCCACACAGTAGTCTTCAAGACCTATGCATTAGAGGGCATGG
AGGTGGTATTTGCCCATCATGGCTGGGCAGGTATCTCTCGGTCCAAAATTTAGAGTCACT
TTCTCTGTGCAATGTATCTTGGAACACACTTCCGCCGCTTGGGGAGTTGAGGGTTATTGA
TGATCCTGATGAAGAGTGTAAGGGTCTTGTCTCAAGCCAAAGTTTCCTAATTTTGAAAAG
ACTAGAATTAGTTGAGATACCAAGACTAGCAAAATGGG



Homology of Contig U35_38994 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None