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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_29675_PI390587928Hv_44K_v2ATGCTCTGGCGTACCTGAAGTACCATCAACATAACCCTGATCTGTACTGCAATGAGACAT481GeneList: None
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9740.9020.7670.6991.3451.198
Raw 2.8645.0284.0005.3533.9233.014



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36155530863e-21485 - 5449758 / 60plus ABC09600 ABC09601 ABC15584
MLOCMLOC_57906.429713e-212493 - 25529758 / 60minus ABC09600 ABC09601 ABC12308 ABC15584
MLOCMLOC_57906.129653e-212383 - 24429758 / 60minus ABC09600 ABC09601 ABC12308 ABC15584
MLOCMLOC_57906.116083e-2175 - 1349758 / 60minus None
MLOCMLOC_57906.231763e-212594 - 26539758 / 60minus ABC09600 ABC09601 ABC12308 ABC15584
MLOCMLOC_57906.330103e-212470 - 25299758 / 60minus ABC09600 ABC09601 ABC12308 ABC15584
MLOCMLOC_57906.1020343e-211452 - 15119758 / 60minus ABC09600 ABC09601 ABC12308
MLOCMLOC_57906.630363e-212498 - 25579758 / 60minus ABC09600 ABC09601 ABC12308 ABC15584
MLOCMLOC_57906.529553e-212414 - 24739758 / 60minus ABC09600 ABC09601 ABC12308 ABC15584
MLOCMLOC_57906.830183e-212499 - 25589758 / 60minus ABC09600 ABC09601 ABC12308 ABC15584
JLOC1JLOC1_37603.431002e-21525 - 5849758 / 60plus
JLOC1JLOC1_37603.329992e-21518 - 5779758 / 60plus
JLOC1JLOC1_37603.230362e-21461 - 5209758 / 60plus
JLOC1JLOC1_37603.129372e-21456 - 5159758 / 60plus
Harvest21ABC492997576e-22278 - 3379758 / 60plus
Harvest35U35_225015493e-25482 - 54110060 / 60plus
Harvest35U35_478277576e-22278 - 3379758 / 60plus



Contig Sequence (549 bp)

>U35_22501 549 Hv_44K_v2
AGAGCGGCACAGAGACAGCAGAGAGCTGAGAGAGCACAGAGCACAGAGAGCTGAGAGAGC
AGGATGAGGGTGGCGGTGGTCGGCGGCGGGGTGAGTGGGCTGGCGGCGGCGCACGAGTTG
CTCGCCGCCAGCGGCGGAGGCGACGTGCGTGTCACCCTGTACGAGCAGGAGGAGAGCCTC
GGAGGGCATGCCAGGACGGTGGCCGTCGACGACGGCGCCGGCGGCTGCGTCAACCTCGAC
CTCGGCTTCATGAGCTTCAACCAGGTGACATATCCCCACATGACGGAGTGGTTAGAAGGG
CTCGGTGTAGAAATGGAGAGATCAGACATGTCTTTCTCAGTCAGTAAACAACCGGAAGGC
AACGGAAGAGGATGTGAGTGGGGAAATGGCAACGGTATCTCAAGCCTCTTTGCGCAAAAA
TCCAATATATTGAAAACAAGTTTTTGGCGCATGCTCGGCGAGATACTCAAGTTCAAGAAC
GATGCTCTGGCGTACCTGAAGTACCATCAACATAACCCTGATCTGTACTGCAATGAGACA
TCGGGACAA



Homology of Contig U35_22501 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None