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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2681_PI390587928Hv_44K_v2GTTGGGTAGCCAGTAGAACTTTTCTTATTTAAGTTATAAAAGGGTACAGTGTGTGATAAG2468GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35776127122e-242480 - 253910060 / 60plus ABC01795 ABC01797 ABC01799 ABC01800 ABC01805
MLOCMLOC_79728.221352e-242027 - 208610060 / 60plus ABC01795 ABC01797 ABC01799 ABC01800 ABC01805
MLOCMLOC_79728.121382e-241903 - 196210060 / 60plus ABC01795 ABC01797 ABC01799 ABC01800 ABC01805
JLOC1JLOC1_53094.123278e-251909 - 196810060 / 60plus
Harvest21ABC0180025763e-252469 - 252810060 / 60plusABC01800
Harvest21ABC420863311e-2349 - 1089859 / 60minus
Harvest35U35_1423625763e-252469 - 252810060 / 60plus



Contig Sequence (2576 bp)

>U35_14236 2576 Hv_44K_v2
CAGAGCTTCATCTGCAGCTACAGCTCCTCTTCAACACAAGTCTTTCTTCAAGACACAGAT
CAATCCAGATACACATACACCTGCCGACGTCTAGCTAGCCTACTTTCAGAATCCAGACAC
ATACACCAGCTAGTTCACCTGTTTAGAACTACTTCTCTGCATATCTCGATGGAGTGCGAG
AACGCACACGTTGCCGCCAACGGCGATGGCCTGTGCGTGGCACAGCCGGCGCGGGCCGAC
CCCCTCAACTGGGGCAAGGCGGCGGAGGAGCTGTCCGGGAGCCATTTGGATGCCGTGAAG
CGGATGGTGGAGGAGTACCGTAAGCCGGTGGTGACCATGGAGGGCGCCAGCCTGACCATC
GCCATGGTCGCCGCGGTGGCTGCCGGCAACGACACCAGGGTGGAGCTCGATGAGTCCGCC
CGCGGCCGCGTCAAGGAGAGCAGCGACTGGGTCATGAACAGCATGATGAACGGCACCGAC
AGCTACGGTGTCACCACCGGCTTCGGCGCCACCTCTCACCGGAGGACCAAGGAGGGCGGC
GCTCTGCAGAGAGAGCTCATCCGATTCCTTAACGCCGGAGCCTTCGGCACCGGCACCGAT
GGCCACGTTCTGCCTGCCGCGACGACGAGGGCGGCGATGCTCGTCCGAGTAAATACCTTG
CTGCAGGGATATTCAGGCATTCGCTTTGAGATCCTGGAGACGATTGCCACACTTCTCAAT
GCCAACGTGACACCATGCCTGCCGCTCCGGGGCACGATCACCGCGTCTGGTGACCTCGTA
CCGCTTTCGTACATTGCGGGCCTGGTCACCGGCCGCCCAAACTCCGTGGCAACCGCTCCA
GATGGCACGAAGGTTAATGCCGCCGAGGCATTTAAGATCGCCGGCATCCAGCATGGCTTC
TTCGAGCTGCAGCCCAAGGAAGGCCTTGCCATGGTGAATGGCACGGCGGTAGGCTCTGGG
CTTGCATCCATGGTGCTTTTCGAGGCTAACGTCCTTAGCCTCCTTGCCGAGGTCCTGTCG
GCCGTCTTCTGCGAGGTGATGAATGGCAAGCCGGAGTACACCGATCACTTGACCCACAAG
CTGAAGCACCACCCTGGACAGATCGAGGCTGCCGCCATCATGGAGCACATTCTTGAAGGC
AGCTCCTACATGATGCTAGCAAAGAAGCTCGGTGAGCTTGACCCATTGATGAAGCCAAAG
CAAGATAGGTATGCACTCCGCACATCGCCTCAGTGGCTTGGCCCTCAGATTGAGGTCATC
CGTGCTGCCACCAAGTCGATCGAGCGGGAGATCAACTCCGTCAATGACAACCCACTCATC
GACGTTTCTCGTGGCAAGGCTATCCACGGTGGCAACTTCCAGGGCACACCTATTGGTGTG
TCCATGGACAACACCAGGCTTGCCATTGCTGCGATCGGTAAACTCATGTTTGCCCAGTTC
TCAGAGCTAGTGAATGACTTCTACAACAACGGTCTGCCTTCCAACCTCTCTGGCGGGCGC
AACCCAAGTTTGGACTATGGCTTCAAGGGTGCTGAGATTGCCATGGCGTCATACTGTTCC
GAGCTTCAGTTCCTGGGCAACCCTGTGACCAACCATGTCCAGAGCGCAGAGCAGCACAAC
CAAGATGTCAACTCTCTTGGCCTCATCTCCTCAAGGAAGACTGCCGAGGCCATTGACATA
CTCAAGCTCATGTCCTCGACATTTTTGGTCGCATTGTGCCAGGCTATCGACCTCCGCCAC
CTCGAGGAGAATGTCAAGAATGCTGTAAAGAGCTGTGTGAAGACGGTGGCCAGGAAGACA
CTAAGCACTGATAGCAATGGCCATCTCCACAACGCACGTTTCTGTGAGAAGGACCTTCTG
CTCACAATTGACCGTGAGGCGGTATTCGCATACGCAGATGACCCATGCAGCGCGAACTAC
CCACTCATGCAGAAGATGCGTGCAGTGCTTGTGGAGCACGCCTTGGCCAATGGTGAGGCC
GAGCACGACGTAGAGACGTCAGTGTTTGCCAAGCTTGCCACGTTCGAGCAGGAGGTCCGT
GCAGTGCTGCCAAAGGAGGTCGAGGCCGCCAGGAGCGCCGTGGAGAATGGCACTGCCGCA
CAGCAAAACCGTATCACGGAATGCCGGTCGTACCCGCTCTACCGGTTCGTGCGCAAGGAG
CTTGGAACAGAGTACTTGACTGGAGAGAAGACGAGGTCTCCTGGGGAAGAAGTGGACAAG
GTGTTCGTTGCCATGAACCAAGGCAAGCACATCGACGCACTTCTTGAGTGCCTCAAGGAG
TGGAATGGTGAGCCCCTGCCTATTTGCTGAACAGAGGATTGAGAAATGGAAGGGTAGTGT
GCTCAGATTTCTGAAAGATCCAGTGATAATACCGTTTTTTCGTTATATTATGTAAAAGTT
GATGTTTGCAATGTTCTTCCAGAGCTGGCAATGCATTGCTAAAGATTGCAATTGCATGAC
TTGGTAGTGTTGGGTAGCCAGTAGAACTTTTCTTATTTAAGTTATAAAAGGGTACAGTGT
GTGATAAGTTTGATGATAAATATACTGGTTCAAGAAAGTAAAAAAAAAAAAAAAAA



Homology of Contig U35_14236 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g43800.17150.0protein|phenylalanine ammonia-lyase, putative, expressed
Brachypodium v1_2Bradi5g15830.17160.0
Arabidopsis v10AT2G37040.17250.0| Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725