- Probe ABC01799
- Source Contig ABC01799
Affymetrix Source Sequence (2000 bp)
>ABC01799 2000 CCGGCAACGACGGGCACGTTCTGCCTGCTGCGGCGACCAGAGCGGCGATGCTCGTCCGTG TCAATACCTTGCTGCAGGGATATTCAGGCATTCGCTTTGAGATACTCGAGACGGTCGCCA CACTTCTCAACGCCAACGTGACACCATGCTTGCCGCTCCGGGGCACGATCACCGCGTCCG GTGACCTCGTCCCGCTTTCCTATATTGCGGGCCTGGTAACCGGCCGCCCAAACTCGATGG CCACGGCTCCGGATGGCACGAAGGTTAACGCTGCAGAGGCATTTAAGATCGCCGGCATCC AGCACGGCTTCTTTGAGCTGCAGCCCAAAGAAGGCCTTGCGATGGTTAACGGCACGGCGG TAGGCTCAGGGCTTGCATCCATGGTGCTTTTCGAGGCTAACATCCTTAGCCTCCTTGCCG AGGTCCTGTCGGCTGTCTTCTGTGAGGTCATGAACGGCAAGCCGGAGTACACTGACCACT TGACTCACAAGCTGAAGCACCACCCAGGGCAAATCGAGGCTGCCGCTATCATGGAGCACA TACTCGAAGGTAGCTCCTACATGATGCTTGCGAAGAAGCTTGGAGAGCTCGACCCATTGA TGAAGCCAAAGCAAGATAGATATGCACTCCGCACGTCGCCGCAGTGGCTTGGCCCTCAGA TTGAGGTCATCCGTGCTGCCACCAAGTCGATTGAGCGAGAGATCAACTCCGTCAACGACA ACCCACTCATCGACGTCTCCCGTGGCAAGGCTATCCATGGTGGCAACTTCCAGGGCACAC CCATCGGTGTGTCCATGGACAACACCAGGCTTGCCATTGCTGCGATTGGCAAGCTCATGT TTGCCCAATTCTCAGAGTTGGTGAACGACCTCTACAACAACGGTCTACCTTCCAACCTTT CCGGTGGGCGCAACCCGAGCTTGGACTATGGCTTCAAGGGTGCCGAGATTGCCATGGCCT CGTACTGCTCTGAGCTCCAGTTCTTGGGCAACCCTGTGACCAACCATGTCCAGAGCGCGG AGCAGCATAACCAAGATGTCAATTCTCTTGGCCTCATCTCCTCTAGGAAGACCGCCGAGG CCATTGACATACTGAAGCTCATGTCCTCGACATTCCTGGTCGCGCTGTGCCAGGCTATCG ACCTCCGCCACCTCGAAGAGAATGTCAAGAATGCTGTCAAGAGTTGTGTGAAGACGGTGG CTAGGAAGACACTGAGCACCAACAGCAATGGCCATCTGCATAGCGCACGCTTCTGCGAGA AGGACCTTCTTCTCACAATCGACCGAGAGGCGGTGTTCGCCTACGCCGACGACCCCTGCA GCGCCAACTACCCACTCATGCAGAAGATGCGTGCAGTTCTTGTGGAGCACGCCTTGGCCA ATGGCGAGGCGGAGCGCGACGTGGAGACGTCTGTGTTTGCCAAGCTTGCCATGTTCGAGC AGGAGCTTCGTGCAATGTTGCCAAAGGAGGTCGAGGCTGCTCGGAGTGCCGTGGAGAACG GTACTGCCACACAACAAAACCGTATCACTGAATGCCGATCATACCCACTCTACCGGTTTG TGCGCAAGGAGCTTGGAACAGAGTACTTGACCGGCGAGAAGACTAGGTCTCCCGGCGAAG AAGTGGACAAGGTGTTTGTTGCTATGAACAAGGGCAAGCACATCGACGCACTGCTTGAGT GTCTCAAGGGTTGGAACGGTGAGCCCCTGCCTATCTGCTAAGGATCAAGAACATGAACAG ATGATAATGTGCTTCAAAGTTCAGAAGGCTTCAGATGTTCTTAGCTGATAAGTGATAACA CTGTTTTTCCATTGGATATTCTTAAAAGTCGATGTTTTGTATTGTTCTTATAGAGCTGCC GGGTTGTTGCCAAAAATTGCAATTGCATGCTTTGGTAGTGGTAGGTAGCCAGTAGAATCT CTACGATGTAGGTTAAAAGGGGTACAATGTGTGATAAATATTCATGAGAAATTTATGTGT CCCAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
---|---|---|---|---|---|---|---|
AK250100.1 | 2586 | 0.0 | 592 - 2573 | 99 | 1974 / 1982 | CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
AK353809 | 2535 | 0.0 | 546 - 2527 | 99 | 1974 / 1982 | CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
MLOC_62322.1 | 2157 | 0.0 | 62 - 2044 | 99 | 1972 / 1983 | CUST_2677_PI390587928 CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
AK250690.1 | 2553 | 0.0 | 563 - 2544 | 99 | 1959 / 1982 | CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
AK248841.1 | 2565 | 0.0 | 579 - 2559 | 90 | 1799 / 2010 | CUST_7486_PI390587928 CUST_2680_PI390587928 CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01803 ABC01805 |
MLOC_79728.2 | 2135 | 0.0 | 148 - 2129 | 88 | 1768 / 2007 | CUST_228_PI415269222 CUST_2681_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
AK357761 | 2712 | 0.0 | 601 - 2552 | 88 | 1744 / 1976 | CUST_229_PI415269222 CUST_228_PI415269222 CUST_2681_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
MLOC_79728.1 | 2138 | 0.0 | 59 - 1777 | 91 | 1560 / 1719 | CUST_228_PI415269222 CUST_2681_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
AK371460 | 2570 | 0.0 | 578 - 2298 | 84 | 1449 / 1726 | None | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01803 ABC01805 |
MLOC_477.3 | 4582 | 0.0 | 902 - 2683 | 83 | 1489 / 1791 | CUST_2702_PI390587928 CUST_232_PI415269222 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01803 ABC01805 |
AK361880 | 2575 | 0.0 | 573 - 2385 | 83 | 1504 / 1819 | CUST_2698_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01805 |
MLOC_67067.1 | 4344 | 0.0 | 317 - 2027 | 82 | 1400 / 1714 | CUST_2699_PI390587928 | ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 ABC46427 |
MLOC_67067.2 | 2660 | 0.0 | 302 - 2012 | 82 | 1400 / 1714 | CUST_2699_PI390587928 | ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 ABC46427 |
MLOC_56386.1 | 1437 | 0.0 | 1 - 1175 | 87 | 1045 / 1204 | CUST_2680_PI390587928 CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01805 |
AK252969.1 | 1534 | 0.0 | 6 - 1347 | 84 | 1132 / 1350 | CUST_2679_PI390587928 CUST_230_PI415269222 | ABC01795 ABC01799 ABC01802 ABC01805 |
MLOC_64900.1 | 2753 | 0.0 | 251 - 1924 | 77 | 1298 / 1686 | CUST_30440_PI390587928 | ABC01797 ABC01799 ABC01803 ABC01805 ABC45783 |
MLOC_40389.1 | 893 | 0.0 | 11 - 890 | 85 | 749 / 883 | None | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
MLOC_34571.1 | 1291 | 0.0 | 1 - 779 | 83 | 647 / 779 | None | ABC01795 ABC01797 ABC01799 ABC01802 |
MLOC_19798.1 | 1812 | 0.0 | 1 - 758 | 84 | 636 / 761 | None | ABC01795 ABC01797 ABC01799 ABC01800 |
MLOC_45784.1 | 470 | 0.0 | 1 - 470 | 92 | 434 / 470 | None | ABC01799 ABC01800 ABC01805 |
MLOC_28752.1 | 546 | 7e-138 | 1 - 546 | 83 | 458 / 551 | None | ABC01795 ABC01799 ABC01805 |