- Probe ABC01797
- Source Contig ABC01797
Affymetrix Source Sequence (2584 bp)
>ABC01797 2584 GGCTTTCGGTTTCGCCCCAAGCTCTTCTTCCTTCCATCCATCTACAATATAAACGTACGC TAATTACTACGTAGCGCTAGTGGTAGCTTCCCCCACATCTGTCGTGCTTGTACTGCTCCC TGCATTGTTTTTGTTCCATCCGTGTAAGTGTAACCTGCAATGGAGTGCGAGACCGGCCTC GTGGGCTCCCTCAACGGCGATGGCCTCTGCGTCTCTGCCCCCCGCGCCGCCGACCCCCTC AACTGGGTGAAGACCGCCGAGGAGCTCACCGGGAGCCACCTGGACGAGGTCAAGAAGATG GTGGCGCAGTTCCGCGAGCCGCTGGTCACCATCGAGGGCGCCTCCCTCGGGATCGCGCAG GTGGCCGCCGTGGCCGCCGGCGCCGGCGTCGCCAGGGTCGCGCTCGACGAGTCCGCCCGC GGCCGCGTCAAGGAGAGCAGCGACTGGGTCATGACCAGCATGATGAACGGCACCGACAGC TACGGCGTCACCACCGGCTTCGGGGCCACCTCCCACCGACGGACCAAGGAGGGCGGCGCG CTACAGAGAGAGCTCATCAGGTTCCTCAACGCCGGTGCCTTCGGAACTGGCACGGACGGA CACGTTCTCCCCGCCGAGGCAACACGCGCGGCTATGCTCGTCCGCATCAACACCCTCCTG CAGGGTTACTCCGGCATCCGCTTCGAGATCCTCGAGGCCATCACCAAGCTGCTCAATGCC AATGTCACGCCGTGCTTGCCGCTCCGGGGCACCATCACCGCATCCGGTGACCTTGTGCCG CTGTCCTACATTGCCGGCCTTATCACCGGCCGACAGAACTCTGTTGCGGTGGCCCCTGAC GGCAGCAAGGTGACCGCTGCTGAGGCGTTCAAGATCGCCGGGATCGAGCATGGCTTCTTT GAGCTGCAGCCCAAGGAAGGCCTTGCCATGGTGAATGGCACGGCTGTGGGCTCTGGTCTT GCATCCACTGTGCTCTTCGAGGCCAATGTTCTTTCCGTCCTTGCCGAGGTCTTGTCTGCC GTGTTCTGCGAGGTGATGAACGGCAAGCCGGAGTTCACTGACCACCTCACCCACAAGCTG AAGCACCACCCTGGACAGATAGAAGCGGCTGCAATCATGGAGCACATCTTGGAAGGAAGC TCATACATGAAGCAGGCAAAGAAGCTTGGTGAGCTCGACCCCTTGATGAAGCCAAAGCAG GACCGTTACGCTCTCCGCACATCACCTCAGTGGCTCGGCCCACAAATTGAAGTTATTCGC TTTGCCACCAAGTCGATCGAGCGTGAGATCAACTCTGTCAACGACAACCCGCTCATCGAC GTCTCCCGTGGCAAGGCTATCCACGGTGGCAACTTCCAAGGCACCCCCATCGGTGTCTCC ATGGACAACACCCGCCTCGCCATTGCTGCTATTGGCAAGCTGATGTTCGCCCAGTTCTCG GAGCTCGTGAACGACTTCTACAACAATGGCCTGCCTTCCAACCTGTCCGGTGGGCGCAAC CCGAGCTTGGACTATGGTTTCAAGGGCGCCGAGATCGCCATGGCCTCATACTGCTCTGAG CTGCAGTTCTTGGGCAACCCGGTGACCAACCATGTCCAGAGCGCGGAGCAGCACAACCAG GATGTGAACTCACTTGGTCTGATCTCATCCAGGAAGACTGCCGAGGCTATTGACATCCTG AAGATCATGTCTTCCACGTTCCTGGTCGCCCTGTGCCAGGCGATTGACCTCCGCCACATC GAGGAGAACATGAAGACAGCGGTGAGGAACTGCGTGATGCAGGTGGCCAAGAAGACCCTG AGCATGAACAACATGGGCGGCCTCCACATCGCCCGCTTCTGCGAGAAGGATCTGCTGACC GCGATCGACCGCGAGGCGGTGTTCGCGTACGCGGACGACCCGTGCAGCCCCAACTACCCG CTGATGCAGAAGCTGCGGGCGGTGCTGGTCGAGCACGCGCTGGCCAACGGCGACGGCGAG CGCGCCCTGGAGACCTCCATCTTCGCCAAGGTGGCGGAGTTCGAGCAGAACATCCGGGCG GCGCTGCCCAAGGAGGTGGAGGCCGCGCGCGCGTCCGTGGAGAACGGCACGCCGCTGGCT CCCAACCGGATCAAGGACTGCCGCTCCTACCCACTCTACCAGTTCGTCCGCGAGGTGTGC GGCACCGAGTACCTGACCGGCGAGAAGACACGGTCGCCCGGGGAGGAGCTGAACAAGGTG CTGGTGGCCATGAACGAGCGCAAGCACATCGACCCGCTGCTGGAGTGCCTCAAAGAGTGG AACGGCGCGCCCCTGCCACTCTGCTGAGCAGTCGACAAGAGAAGGTAACTCCAAAAGAAA GAAAAGAAAACACGTACACACAAAGTGAATATAGAACTGTTCAAGACTGTGAAGCGGGAG GTTCATGATATGTCTAAGTTTCATTGTAGTTAAGTTGATGTTACTGCTGTTGTTTTTCCG CTGCCGCCATGCCATGAGCAGGCGAGGCAGGCAGCCTCTCAAACTTGTGTTGTTGTTGTA ACTTGTACGATGGGAGCTTAAGTACATTACTTTGTTTCGTAATAAAAAAAAAAAAAAAAA AAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_67067.2 | 2660 | 0.0 | 43 - 2605 | 99 | 2562 / 2563 | CUST_2699_PI390587928 | ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 ABC46427 |
| MLOC_67067.1 | 4344 | 0.0 | 3732 - 4292 | 99 | 560 / 561 | CUST_2699_PI390587928 | ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 ABC46427 |
| AK248841.1 | 2565 | 0.0 | 158 - 2303 | 82 | 1764 / 2158 | CUST_7486_PI390587928 CUST_2680_PI390587928 CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01803 ABC01805 |
| AK357761 | 2712 | 0.0 | 180 - 2325 | 82 | 1762 / 2161 | CUST_229_PI415269222 CUST_228_PI415269222 CUST_2681_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
| AK250100.1 | 2586 | 0.0 | 171 - 2310 | 81 | 1748 / 2152 | CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
| AK250690.1 | 2553 | 0.0 | 142 - 2281 | 81 | 1747 / 2152 | CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
| AK361880 | 2575 | 0.0 | 221 - 2291 | 82 | 1699 / 2084 | CUST_2698_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01805 |
| MLOC_4684.1 | 2710 | 0.0 | 440 - 2513 | 81 | 1694 / 2081 | CUST_28141_PI390587928 CUST_2683_PI390587928 | ABC01797 ABC01800 ABC01805 ABC18558 |
| AK353809 | 2535 | 0.0 | 351 - 2264 | 82 | 1580 / 1917 | CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
| MLOC_477.3 | 4582 | 0.0 | 965 - 3035 | 81 | 1690 / 2080 | CUST_2702_PI390587928 CUST_232_PI415269222 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01803 ABC01805 |
| AK371460 | 2570 | 0.0 | 222 - 2296 | 81 | 1692 / 2086 | None | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01803 ABC01805 |
| MLOC_79728.1 | 2138 | 0.0 | 1 - 1783 | 81 | 1458 / 1789 | CUST_228_PI415269222 CUST_2681_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
| MLOC_62322.1 | 2157 | 0.0 | 326 - 2074 | 82 | 1430 / 1752 | CUST_2677_PI390587928 CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01803 ABC01805 |
| MLOC_79728.2 | 2135 | 0.0 | 118 - 1872 | 81 | 1435 / 1761 | CUST_228_PI415269222 CUST_2681_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
| MLOC_64900.1 | 2753 | 0.0 | 255 - 2296 | 78 | 1614 / 2058 | CUST_30440_PI390587928 | ABC01797 ABC01799 ABC01803 ABC01805 ABC45783 |
| MLOC_19798.1 | 1812 | 0.0 | 4 - 1112 | 82 | 911 / 1114 | None | ABC01795 ABC01797 ABC01799 ABC01800 |
| MLOC_40389.1 | 893 | 0.0 | 4 - 893 | 83 | 742 / 892 | None | ABC01795 ABC01797 ABC01799 ABC01800 ABC01805 |
| MLOC_56386.1 | 1437 | 0.0 | 1 - 934 | 81 | 758 / 937 | CUST_2680_PI390587928 CUST_10881_PI390587928 | ABC01795 ABC01797 ABC01799 ABC01800 ABC01802 ABC01805 |
| MLOC_34571.1 | 1291 | 2e-129 | 1 - 777 | 78 | 608 / 783 | None | ABC01795 ABC01797 ABC01799 ABC01802 |
| MLOC_53210.1 | 333 | 1e-62 | 1 - 317 | 81 | 259 / 321 | None | ABC01797 ABC01800 |
| MLOC_16977.1 | 484 | 5e-61 | 222 - 484 | 83 | 221 / 266 | CUST_2698_PI390587928 | ABC01797 ABC01800 |
| MLOC_40792.1 | 475 | 2e-54 | 1 - 266 | 81 | 219 / 269 | None | ABC01797 ABC01800 |