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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_22281_PI390587928Hv_44K_v2AAGTACAAGTTTTGCATCCTACATGCACGGAACATCAGAATCACTGAAGATTTTCGCAAA13GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_62076.115999e-22898 - 9569858 / 59plus ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
MLOCMLOC_62076.216809e-22979 - 10379858 / 59plus ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030
JLOC1JLOC1_40605.317475e-221046 - 11049858 / 59plus
JLOC1JLOC1_40605.215995e-22898 - 9569858 / 59plus
JLOC1JLOC1_40605.116805e-22979 - 10379858 / 59plus
Harvest21ABC463076313e-2514 - 7310060 / 60minusABC46307
Harvest35U35_463416313e-2514 - 7310060 / 60minus



Contig Sequence (631 bp)

>U35_46341 631 Hv_44K_v2
TTTTTTTTTTTTTTTTGCGAAAATCTTCAGTGATTCTGATGTTCCGTGCATGTAGGATGC
AAAACTTGTACTTTACACATGGAGTTGCACAACAAAAATGACATCATCTATGGTTTGGTT
CAAACTTGATCATCAGATTTTACATACATATTAGTACACGAGATGCACAAAGCAGAATCA
ACATCAGCAGCAGCATGCCCTTATGGCTGTGTAACCAAAAAAAAAACAGTAGTTCATACG
GGCTAAAATGCCCGGAGTTGGGTGGATGTTTGAGATCAGTCGAGGACGTAGATGCGGGAG
GCGATGTCCTGGACCAGCCAGTCGAAGCCCTGGAGCAGGCCGTCGCCGGTGTAGGCGCTG
CACCCGACGATCTTCCAGTGCCGGTCCTTGTTCATCACTTCAAGATTCAGAACCTCTTCT
TTCAAAAGATTGTGGAGCTCAGCACGGCAATCGTCGAGCCTCCGGACGTCGGAACTATCC
ACCACCCAAACTAGACCGTCAGTCTGCTCGAAGTAGTTCCTCCAATACGAACGGATGGTC
TTCTGGCCCCCGACATCCCATATGTTGAGCGAGTACTTTTGGTACTGGATGGTTTTGATA
TTAAAGCCAAGAGTAGGGCTGATGACACTGG



Homology of Contig U35_46341 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None