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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_21288_PI390587928Hv_44K_v2TGGGCCTTGAACCTTTATGTGTAGAGGAGTCGATGAATGATGTATTATAATTTATGTGAT538GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_75318.13997e-23322 - 3819859 / 60plus ABC05377 ABC08513 ABC13191 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC47321
MLOCAK249443.17203e-21626 - 6859758 / 60plus ABC01494 ABC13191 ABC16434 ABC18776 ABC21257 ABC38369
MLOCAK3739086073e-21508 - 5679758 / 60plus ABC01494 ABC13191 ABC16434 ABC18776 ABC21257 ABC38369
JLOC1JLOC1_53699.26692e-21549 - 6089758 / 60plus
JLOC1JLOC1_53699.16462e-21526 - 5859758 / 60plus
Harvest21ABC385995483e-2553 - 11210060 / 60minusABC38599
Harvest21ABC254365206e-221 - 5410054 / 54minusABC25436
Harvest35U35_124196503e-25539 - 59810060 / 60plus
Harvest35U35_257185206e-22467 - 52010054 / 54plus
Harvest35U35_238066056e-22486 - 5459758 / 60plus



Contig Sequence (650 bp)

>U35_12419 650 Hv_44K_v2
TATTACTGCTGCACAAAGCTGTCGAGCTTGGTCGTTTTCCTTTCTTGGTTGTATTTGCAG
ACCAGGACACACATCGTGGTGACTTGGTCAGCTCCTTGGTCATCATCTGGTCCATCACCG
AGCTGCTGCGACAACCTGTGAACCCGCCGGCGGCAGCAAGCTAAAGGCTCCCCCTTGCAA
GGTCAAAGGAGAAGTACAACAGCGGCAATGTCCTGGAGCAGCACGACGATCTGGACGGGA
AGGAGGGTAGCAGCAGGACGAGAGGCGCAACTAAGCCGTCTTGCTCTCTTCGGTCGACCC
TCCATGCCGGACGCCACAAGATCTTCTGTCTGCAGAAAGTTGTAACAAAATTTCTCACTA
TGGAGTCCTTGCTTGACGAGAGCGTTGACAAGGAGATAAATTTGCAGATCGAATGAGGTG
GAACTCCTTTAACAGTAACGCTGAAGGATGATCTAAAGCACCCAAAAGAAGTAGAGGACA
TGACGGGAGAAGGGAACAAGAAGCTTCGTTTATCATTGATGTTATGTTGTGCACTTGTTG
GGCCTTGAACCTTTATGTGTAGAGGAGTCGATGAATGATGTATTATAATTTATGTGATGT
GTTACTGAAATGAAATATATACAACTAATTTGCAAAAAAAAAAAAAAAAA



Homology of Contig U35_12419 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None