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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_1951_PI390587928Hv_44K_v2TGTCAGTTTCATTCATGCTGGATGTTCTCATTCAGGTTCTGGAATTTATAGCTTTCCTTA16GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_19951.221172e-24344 - 40310060 / 60plus ABC07668 ABC17988 ABC47338
MLOCMLOC_19950.18112e-24332 - 39110060 / 60plus ABC07668 ABC17988 ABC47338
MLOCMLOC_19951.121102e-24344 - 40310060 / 60plus ABC07668 ABC17988 ABC47338
MLOCMLOC_19951.419902e-24343 - 40210060 / 60plus ABC07668 ABC17988 ABC47338
MLOCMLOC_19951.324192e-24344 - 40310060 / 60plus ABC07668 ABC17988 ABC47338
JLOC1JLOC1_13830.320178e-25328 - 38710060 / 60plus
JLOC1JLOC1_13830.222348e-25344 - 40310060 / 60plus
JLOC1JLOC1_13830.122488e-25344 - 40310060 / 60plus
Harvest21ABC473385703e-2517 - 7610060 / 60minusABC47338
Harvest35U35_467905703e-2517 - 7610060 / 60minus



Contig Sequence (570 bp)

>U35_46790 570 Hv_44K_v2
TTTTTTTTTTTTTTTTTAAGGAAAGCTATAAATTCCAGAACCTGAATGAGAACATCCAGC
ATGAATGAAACTGACATATGTACAAGCTACTTGAGTTGAAAAGTATACAATCAGCAGTAA
TCATCAAATTTAGCAAGACTTATTTTACAAGTTGCCAAATTAAAATAGGAAGTTCCGTTG
CAAACCGAGAAGATGCACTGAAGATTCGTAACAAGATCTCACTGGAGAACCACCAGAAGA
ACATCACTTCTGAAAATCAATTCCATACCAACAAATCGGAATCATATTCAGTGGACATGA
CACTAATCAAAGACATGATGAGGAGTAGAGTGTCCATGGCAAATTGTTTGTTCAAGCTTC
CAGTTCAGAAGCTTCAACTCTCCATTGTTTTGGTATATAGCGTTAATCCCTAACCTCTTT
TTGCATATCAAGCCATCCACATTACCCAAATATAAGTCAGGAGAGGATCACAAGCCAAAA
ATACGACAGATTTTGATGGCTACCAGCATGGCTTGGGCTAAACAATCTGCAACCACAAGG
CGGAAGCAAAAACCACAATCAATGCTAGCA



Homology of Contig U35_46790 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None