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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_1943_PI390587928Hv_44K_v2TGAACTCGATGGCAAATGCGTTGGCGTAGATGTAGGTGGTCTTCATGGCTGCGAAGCCGG291GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35940213622e-241090 - 114910060 / 60minus ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC29740 ABC46271 ABC47157
MLOCMLOC_65378.215082e-241290 - 134910060 / 60minus ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC46271 ABC47157
MLOCMLOC_65378.116612e-241290 - 134910060 / 60minus ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC29740 ABC46271 ABC47157
JLOC1JLOC1_43018.119668e-251287 - 134610060 / 60minus
Harvest21ABC025396553e-25331 - 39010060 / 60minusABC02539
Harvest21ABC0253410133e-25804 - 86310060 / 60plus
Harvest21ABC025287083e-25340 - 39910060 / 60minusABC02528
Harvest21ABC462713432e-21254 - 3129757 / 59plusABC46271
Harvest35U35_467985013e-25292 - 35110060 / 60plus
Harvest35U35_149166433e-25331 - 39010060 / 60minus
Harvest35U35_1491411443e-25785 - 84410060 / 60minus



Contig Sequence (501 bp)

>U35_46798 501 Hv_44K_v2
GGACGCTGTCCTTGACGGCGGCATCCCGTTCAACAAGGCGTACGGGATGTCCGCGTTCGA
ATACCACGGCACGGACCCGCGCTTCAACCGCGTGTTCAACGAAGGGATGAAGAACCACTC
CATCATCATCACCAAGAAGCTCCTCGAGGTGTACAAGGGCTTCGAGGGCCTCGGCACCAT
CGTCGACGTGGGCGGCGGCGTGGAAGTACATATGCAGGTTGACGCAGCAGCGCCAGCGAG
CAAGAGCAAGATGGTCTCAGATCGGTGGGCGGTTGCCATGGATCTACTTGGTGAACTCGA
TGGCAAATGCGTTGGCGTAGATGTAGGTGGTCTTCATGGCTGCGAAGCCGGCGCCCTTGG
CCAGGGCCTCGAACTCCCTCTCGTACCTCTCCCTGCCGCCGGGGTTGTGCGCGAGCATGA
TCATGTCGACGTGGAACACCCCCTGCGCCTTGGGCGTGGTCTCCGGGTTTATCGGACGGA
TGCACTCCACGAGCACCACCT



Homology of Contig U35_46798 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None