barSeed - Barley Seed Development Database

Probe ABC02535

Source Contig ABC02535

barSeed

Links

Affymetrix Source Sequence (636 bp)

>ABC02535 636
TCAAAGGCATCAACTTCGACCTTCCCCATGTCATCTCCGAGGCGCCGCCGTTCCCGGGTG
TCACCCACGTGGGCGGCGACATGTTCCAGAAGATTCCCTCGGGGGACGCCATCCTCATGA
AGTGGATCCTTCATGACTGGAGCGACGAGCACTGTGCAACGCTGCTGAAGAACTGTTACG
ACGCGCTGCCGGCGCACGGCAAGGTGGTGCTCGTGGAGTGCATCCTGCCGGTCAATCCGG
AAGCTACCCCTAAGGCACAGGGTGTGTTCAACCTTGACATGATCATGCTCGCGCACAACC
CAGGTGGTAGGGAGAGGTATGAGAGGGAGTTCGAGGCCCTGGCCAAGGGCGCCGGGTTCG
CCTCCATCAAGGCCACTTACATCTACGCTAACGCATGGGCAATCGAGTTAACTAAGTAGA
TGCATGATAACTTCCAAGTATCTCTTGCATGCTCATTGCTGCTCCCACATCGACCTCATT
ATGCAATTTCGCTTCTTTTATCCCTATGTTTTCCCTTAATTTTTGCATCCTTTGAATCAT
TCCAATTTCTAATTGTTGTGCCATTGGTCCATTCCATATGTATTATGACAAAGCTTCTCT
TAAATGTTGCATTAATTATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_57100.1	1322	0.0	764 - 1322	98	550 / 561	None	ABC02528 ABC02532 ABC02535 ABC02539 ABC42006 ABC47157
AK359402	1362	1e-156	739 - 1164	90	384 / 426	CUST_1943_PI390587928 CUST_35657_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC29740 ABC46271 ABC47157
MLOC_65378.2	1508	1e-156	939 - 1364	90	384 / 426	CUST_1943_PI390587928 CUST_35657_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC46271 ABC47157
MLOC_65378.1	1661	1e-156	939 - 1364	90	384 / 426	CUST_35661_PI390587928 CUST_1943_PI390587928 CUST_35657_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC29740 ABC46271 ABC47157
MLOC_73233.1	1356	4e-156	180 - 601	90	381 / 422	CUST_35659_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC47157