barSeed - Barley Seed Development Database

Probe ABC02532

Source Contig ABC02532

barSeed

Links

Affymetrix Source Sequence (1357 bp)

>ABC02532 1357
GCTCGGTCGCTGGCTCACACTCTCACCACCACGTACGTAACAGCAGGCAGCAGCTAGGCT
CCGGAGAGGCAGAAGCAAGCAGAGAGATGGGGTCCATCGCCGCCGGCGCCGACGAGGATG
CGTGCATGTACGCTCTCCAGCTCGTCTCGTCGTCGATCCTCCCAATGACGCTGAAGAACG
CCATCGAGCTGGGACTCCTCGAGACCCTGATGTCTGCCGGCGGCAAGTTCTTGACTCCCG
CCGAGGTGGCTGCCAAGCTCCCGTCCACGGCGAACCCGGAAGCGCCGGACATGGTGGACC
GCATGCTCCGGCTGCTGGCCTCGTACAAGGTGGTGTCGTGCAGGACGGAGGAGAGCAAGG
ACGGCCGCCTCTCCCGGCGGTACGGCGCCGCGCCCGTGTGCAAGTACCTCACCCCCAACG
AGGACGGCGTCTCCATGTCGGCGCTGGCGCTCATGAACCAGGACAAGGTCCTCATGGAGA
GCTGGTACTATCTCAAGGATGCGGTCCTAGACGGTGGCATCCCGTTTAACAAGGCGTACG
GGATGTCGGCGTTCGAGTACCACGGCACGGACCCACGCTTCAACCGTGTCTTCAACGAAG
GGATGAAGAACCACTCCATCATCATCACCAAGAAGCTCCTCGAGTCCTACAAGGGCTTCG
AGGGCCTCGGCACCCTTGTCGACGTGGGCGGCGGCGTCGGCGCCACCGTTGGTGCCATCA
TCGCGCGCTACCCCGCCGTCAAAGGCATCAACTTCGACCTCCCCCACGTCATCTCCGAGG
CGCCGGCGTTCCCAGGTGTGACCCACATCGGCGGCGACATGTTCCAGAAGGTGCCCTCGG
GCGATGCCATCCTCATGAAGTGGATCCTCCACGACTGGAGCGACGAGCACTGCGCGACGC
TGCTCAAGAACTGCTATGACGCCTTGCCGGCGCACGGCAAGGTGGTGCTCGTGGAGTGCA
TCCTGCCGGTGAATCCAGAAGCCACGCCTGAGGTGCAGGGTGTGTTCCATGTGGACATGA
TCATGCTCGCGCACAACCCGGGTGGCAGGGAGAGGTACGAGAGGGAGTTCGAGGCCCTGG
CCAAGGGCGCCGGGTTCGCCGCCATGAAGACCACTTACATCTACGCCAACGCATGGGCCA
TCGAGTTCACCAAGTAGATGATCCATGCATGACAACGTCCACCCATCTCATGCTCTGCAT
CCACCTGCATGCATGTGTACTTTCTTTTGGTTTTACCTTAATTTTGCCATTCTCTAAATC
GTTCTAAATTCCAATGGTTGTGTCGTCGGTCGATTCGAAATGTACTACTCCACTATTAAT
AATTCTGACATGATTTCACTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_73233.1	1356	0.0	1 - 1339	100	1339 / 1339	CUST_35659_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC47157
AK359402	1362	0.0	95 - 1159	92	983 / 1066	CUST_1943_PI390587928 CUST_35657_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC29740 ABC46271 ABC47157
MLOC_65378.2	1508	0.0	295 - 1359	92	983 / 1066	CUST_1943_PI390587928 CUST_35657_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC46271 ABC47157
MLOC_65378.1	1661	0.0	295 - 1359	92	983 / 1066	CUST_35661_PI390587928 CUST_1943_PI390587928 CUST_35657_PI390587928	ABC02528 ABC02532 ABC02535 ABC02539 ABC05312 ABC29740 ABC46271 ABC47157
MLOC_57100.1	1322	0.0	132 - 1185	89	934 / 1054	None	ABC02528 ABC02532 ABC02535 ABC02539 ABC42006 ABC47157
MLOC_15068.1	1185	2e-172	1 - 1016	78	792 / 1019	None	ABC02532 ABC05312