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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_11708_PI390587928Hv_44K_v2CTGTGAGTGACAAGTGCTGCAATTTGGAGCATGAATTATTAATTAATTGTGTGATGCAAA18GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_56278.312879e-221042 - 10999857 / 58plus ABC01216 ABC01222 ABC01223 ABC01225 ABC01228 ABC01237 ABC01242
MLOCMLOC_56278.221199e-221991 - 20489857 / 58plus ABC01216 ABC01222 ABC01223 ABC01225 ABC01228 ABC01237 ABC01242
MLOCAK250563.112893e-211233 - 12899856 / 57plus ABC01216 ABC01222 ABC01223 ABC01225 ABC01228 ABC01237 ABC01242
JLOC1JLOC1_36383.119045e-221659 - 17169857 / 58plus
Harvest21ABC012345651e-2315 - 749859 / 60minus
Harvest21ABC0121612551e-231178 - 12379859 / 60plusABC01216
Harvest21ABC411982452e-2233 - 909857 / 58minus
Harvest35U35_436745653e-2519 - 7810060 / 60minus
Harvest35U35_1383313781e-231253 - 13129859 / 60plus



Contig Sequence (565 bp)

>U35_43674 565 Hv_44K_v2
TTTTTTTTCTTTTTTTTTTTTGCATCACACAATTAATTAATAATTCATGCTCCAAATTGC
AGCACTTGTCACTCACAGCGGTTTTACAGGTTCAATCCAACACCAACACTAACGGTAACA
GCTAATATAGTAATTCGACAACATTAAGGGCGACAAGGAGTAATAACTGAAGAGTGAAAA
CGGCGATCCATGGTGGCCTCTCTCTCTCTCTCTCACTCACATGCATGCACAGACACTGAA
CGAGGCCGGATGGGCACGATGGAGGAACAGTACTGCCAACACGAAGCCCGTCCGTTTGTG
TGGATAGCTAGCGCCGGATGGACACGAGGAGCAGTACTGCCACCGTTGCATTAAATTATT
GGCCGGCGTGCTCAATTGCTCCGGCTGCTCCGGAAGGAACCCAGCGCCTTGATGGCCGCC
GCCCGGAGGATGTACTGGTGGTACGCCGCCGCCGCCAGCGCTCCGACGAACGGGCCGACC
CAAAAGATCCAGTGGTTGTCCCATGCGGCCTTCTTGTTGTAAATGACCGCGGCGCCCAGG
CTCCTGGCGGGGTTGATGCCGGTGC



Homology of Contig U35_43674 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None