barSeed - Barley Seed Development Database

Probe ABC51294

Source Contig ABC51294

barSeed

Links

Affymetrix Source Sequence (356 bp)

>ABC51294 356
AGCGGTGCTCCTTGCATCCAGCTATGTGAAACGGACGACCCAACATGGAATTGTTTTGTT
CGTACCTTTGAAAGCGACGAGGTCTAGACTGGAACAAATACAACAAGGAAGATATTTTGC
TAGAGGAGAAACATGTGAACTTCAGTTCTGTTGAGAGATATGTAAGACGGCTACACATTT
GTTTGGGGTAACTTTGATGTATAGACTTGTGCGATCTGTGTGCATAAGATATTACTTTAT
CCAGTCTATCCAGTGGTGTACACCTAATCTTCTTGTTGATCTTTCTTTTCTAGAGTGTTT
TTGTTATGAACTCTTCCGTGAATTTGGAGTATTTTTTTTCAAAAAAAAAAAAAACC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_7963.19	4817	9e-180	3072 - 3412	100	341 / 341	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.15	5250	9e-180	3299 - 3639	100	341 / 341	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.16	5402	9e-180	3299 - 3639	100	341 / 341	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.24	1724	9e-180	8 - 348	100	341 / 341	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.2	5086	9e-180	3315 - 3655	100	341 / 341	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.4	5709	9e-180	3315 - 3655	100	341 / 341	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.6	5512	9e-180	3555 - 3895	100	341 / 341	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.7	5610	9e-180	3555 - 3895	100	341 / 341	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.12	5369	9e-180	3354 - 3694	100	341 / 341	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.9	6183	5e-152	3532 - 3822	100	291 / 291	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.14	5130	5e-152	3299 - 3589	100	291 / 291	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.23	2248	5e-152	8 - 298	100	291 / 291	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.3	6475	5e-152	3888 - 4178	100	291 / 291	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.21	2764	5e-152	424 - 714	100	291 / 291	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.13	5633	5e-152	3354 - 3644	100	291 / 291	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.8	5023	8e-81	3489 - 3651	100	163 / 163	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.10	4911	1e-79	2921 - 3081	100	161 / 161	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.18	4741	1e-79	2461 - 2621	100	161 / 161	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.22	2073	1e-79	93 - 253	100	161 / 161	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.11	4451	1e-79	2743 - 2903	100	161 / 161	None	ABC06593 ABC51294
MLOC_7963.5	5125	6e-52	3517 - 3627	100	111 / 111	None	ABC06593 ABC51294