barSeed - Barley Seed Development Database

Probe ABC06593

Source Contig ABC06593

barSeed

Links

Affymetrix Source Sequence (1843 bp)

>ABC06593 1843
ATCATGTTCCTCAGCCTGGAGAAGAGCCTTGCCCCCTGGACCCCTGGATTGCAGTCCCTG
ACAAGAGCAAGTATGTGGATCTACAGACTCTCAAATTGCAGGAAAATCCCGAGGATGTTC
CAACCGGTGAGCTTCCACGGAATGTGCTGCTTTCTGTAGACAGACATCTTGTTCAGACAA
TTGTTCCAGGCACTAGATTAACTGTGGTTGGCATCTACAGTGTATTCCAAGCATCTGGGA
CAAACAACCAGAAAGGTGCTGTTGGAGTTAAACAGCCCTACATTAGAATTGTGGGGTTAG
AGCAGTCTCGAGATGACAACACAAATGGACCCTCACATTTCACACTCGATGAGGAAATGG
AATTCAAAGAATTTGCGCAGAGGCCAGATGCATATTCCAAGATTTGTTCAATGATTGGCC
CTTCAATTTATGGTCATGGTGATGTCAAGAAAGCTATTGCGTGCCTTTTGTTTGGGGGAT
CAAAGAAGAGGCTACCAGATGGTGCCCGTTTGAGAGGGGACATTCATGCCTTGCTCTTGG
GTGATCCATCCACAGCAAAATCCCAGTTTCTCAAGTTTGTAGAGAAGACGGCACCAATTG
CAGTCTATACCTCTGGAAAAGGTTCATCTGCAGCTGGTCTTACAGCATCTGTAACCCGGG
ATAGTAACTCGCGTGAGTTTTATTTGGAAGGAGGGGCCATGGTATTGGCTGATGGTGGAG
TGGTTTGTATTGATGAATTTGACAAAATGAGGCCTGAAGACAGGGTTGCAATTCATGAGG
CCATGGAGCAGCAGACCATATCTATTGCCAAGGCTGGCATTACAACAGTACTCAATTCGA
GGACCTCAGTTCTTGCAGCTGCCAATCCAATTTCGGGCCGGTATGATGATCTGAAGACCG
CACAAGATAATATAGATCTGCAGACAACAATCCTTTCTCGGTTTGATCTAATCTTCATAG
TTAAAGATGTCAGAATGTATGAGCAAGATAAGCGAATAGCAAATCACATCATTAAGGTGC
ATGCCAGTGGTGCTGCAACTCAAGCAAACAAGAATGCAGATGTCAATGAAGGAGAGAATT
GGCTGAAAAGGTATGTTGAGTACTGCCGCAACACATGTAGACCACGACTCTCAGAAAAAG
CAGCAGAGATGCTGCAGAACAAATATGTTGAGATCAGACAGAAAATGAGACAACAATCCC
ACGAGACAGGAAGAGCTGCAGCCATACCCATCACTGTGAGGCAGCTTGAAGCTATTATAC
GGTTGAGCGAATCTCTTGCAAAGATGAGATTGACTAGTGTGGCTACGCCAGAGCACATCG
AAGAGGCATTTAGACTGTTCAATGTCTCCACCGTTGATGCCGCAAGATCTGGAATCAACG
AGCATCTTAACTTGTCACCGGAGATTGCAAATGAAATCAAGCAAGCTGAAGCACAGATAA
AGAGAAGGATGGGAATTGGGAGCCACATATCTGAGCGACGGCTGCTTGATGAACTGAATC
GGATGGGGATGAACGAATCCATTGTGAGAAGAGCCCTTGTGATTATGCACCAGAGGGATG
AAGTGGAGTACAAGAGGGAGCGCCATGTGATTGTCCGCAAGGCTTGAGCTGAACTGAACC
ATGGAACTATCTGATGTGTGTGTATAAGTAGTGCTGACACTGCAGCCTGTTTCCTGAGGA
AATTTGTTGCGTCGTTGAAATTGAGTTGTAGTAGTTGTACTACTTTAAGCTGTAACTGTA
GCCCTAAATTATCTTGTGTCGAACTGAAGATGTACCACAGTAAGTTCATTCATGAATGCA
ACATTTGGGCGTTCTGCAGCTGAGCAGAGTCTATGCCTGGGAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10314.2	1698	0.0	89 - 1269	99	1179 / 1181	None	ABC06592 ABC06593
MLOC_10314.1	1701	0.0	89 - 1272	99	1179 / 1184	None	ABC06592 ABC06593
AK361863	880	0.0	1 - 880	100	880 / 880	None	ABC06592 ABC06593
MLOC_21120.1	1334	0.0	727 - 1334	98	601 / 611	None	ABC06592 ABC06593
MLOC_21120.2	1543	7e-53	389 - 502	100	114 / 114	CUST_20203_PI390587928	ABC06592 ABC06593
MLOC_7963.9	6183	1e-109	5182 - 5427	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.10	4911	1e-109	3910 - 4155	96	237 / 247	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.8	5023	1e-109	4136 - 4381	96	237 / 247	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.18	4741	1e-109	3729 - 3974	96	237 / 247	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.19	4817	1e-109	3897 - 4142	96	237 / 247	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.15	5250	1e-109	4273 - 4518	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.16	5402	1e-109	4434 - 4679	96	237 / 247	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.14	5130	1e-109	4639 - 4884	96	237 / 247	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.24	1724	1e-109	702 - 947	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.23	2248	1e-109	1658 - 1903	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.22	2073	1e-109	1051 - 1296	96	237 / 247	CUST_27346_PI390587928	ABC06593 ABC51294
MLOC_7963.2	5086	1e-109	4140 - 4385	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.3	6475	1e-109	5538 - 5783	96	237 / 247	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.4	5709	1e-109	4763 - 5008	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.21	2764	1e-109	1761 - 2006	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.6	5512	1e-109	4601 - 4846	96	237 / 247	CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.7	5610	1e-109	4690 - 4935	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.11	4451	1e-109	3521 - 3766	96	237 / 247	None	ABC06593 ABC51294
MLOC_7963.12	5369	1e-109	4489 - 4734	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.13	5633	1e-109	4694 - 4939	96	237 / 247	CUST_27346_PI390587928 CUST_35853_PI390587928	ABC06593 ABC51294
MLOC_7963.5	5125	1e-51	4987 - 5122	94	128 / 136	None	ABC06593 ABC51294