barSeed - Barley Seed Development Database

Probe ABC47652

Source Contig ABC47652

barSeed

Links

Affymetrix Source Sequence (448 bp)

>ABC47652 448
CCAAAATTACTGGCGAAAAAGTCCCTAGGACTAATTTCAGGAGTGCTACTTCTGCCTCAA
GAGGAAAAGCTCATGGCTAATTCAAGGCACCGAGACGCGTGTTTGTACATATCGGTAGCT
TGCCGAGCATGGAAGCAAAAAGGATAGGATTTGAGTGAAGGCTTTTGGACCTGGTGTGTG
TGTGGATGTACTATAAAACTAGCTTAAGTTAGTGGCTTTTCTCTCTTTATTGCACTGGAC
AGTATTATTGTGTCGTAGGATTAGCCATTAATCACCCCCAAACCCTCCGTTTAATCTGTA
TGGATACAATGCCAAGGAGAAGAACGACGGGTTCTGGTTTAAACTTACTCATCAACGGTT
GTACTTTACCTTCTCTAGTACCAGCCCCATGTTGGAATGATTGACTGGTGCTTTTTGGTT
CCAGTGTGCTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_51141.5	7201	0.0	185 - 615	100	431 / 431	CUST_22202_PI390587928 CUST_41143_PI390587928 CUST_22201_PI390587928 CUST_14796_PI390587928 CUST_41128_PI390587928	ABC08959 ABC41656 ABC47652
MLOC_51141.3	7988	0.0	5001 - 5431	100	431 / 431	CUST_38745_PI390587928 CUST_22201_PI390587928 CUST_14796_PI390587928 CUST_2738_PI390587928 CUST_22202_PI390587928	ABC08959 ABC18762 ABC47652
MLOC_51141.6	6944	0.0	24 - 454	100	431 / 431	CUST_41128_PI390587928 CUST_41143_PI390587928 CUST_14796_PI390587928 CUST_22201_PI390587928	ABC08959 ABC41656 ABC47652
MLOC_51141.7	6871	0.0	1 - 384	100	384 / 384	CUST_41128_PI390587928 CUST_22201_PI390587928 CUST_14796_PI390587928 CUST_41143_PI390587928	ABC08959 ABC41656 ABC47652
MLOC_51141.8	7002	5e-178	1 - 338	100	338 / 338	CUST_41143_PI390587928 CUST_22201_PI390587928 CUST_14796_PI390587928 CUST_41128_PI390587928	ABC08959 ABC41656 ABC47652
MLOC_51141.9	7007	5e-178	1 - 338	100	338 / 338	CUST_41143_PI390587928 CUST_14796_PI390587928 CUST_22201_PI390587928 CUST_41128_PI390587928	ABC08959 ABC41656 ABC47652
MLOC_51141.10	4283	2e-133	1 - 258	100	258 / 258	CUST_22201_PI390587928 CUST_14796_PI390587928 CUST_41143_PI390587928 CUST_41128_PI390587928	ABC08959 ABC41656 ABC47652
MLOC_51141.11	6622	1e-80	1 - 163	100	163 / 163	CUST_41143_PI390587928 CUST_14796_PI390587928 CUST_22201_PI390587928 CUST_41128_PI390587928	ABC08959 ABC41656 ABC47652