barSeed - Barley Seed Development Database

Probe ABC46432

Source Contig ABC46432

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (449 bp)

>ABC46432 449
AGGCAAGGTGTTTTTCTCCAGGGATAGTTTGAAGACGAGGACGAGATGACGAGGGAGGCA
GCCCAAGGCGCAAGAAGGTGTTCTTTTGTTGCGGCGAACGGCGATCAGGCGAGGGAGGCG
AATGGCGACCAGGCGAGGCCCAAGAACGAGCAGCACGAACGGCGACCAGGCAAGGCGGGG
GGACGGCGATCAGGCGAGGCAGGCGATGGCGACGAACGGCTACCGGCAAGGCCCAAAAAA
AAGCCCCCCGACCGCCGCCCAGGGAGGCGAGCGGCGACCAAACGAGGGAGGCGATGGCGG
CGAACGACGACCAGGCCAGGCAGGCGAACGGCGATCAGGCGAGGGAGGCATGCGTGCGTG
GGTGATATTGTAATCAACTATGGACAAGGCGTGCGTGCGTGGGTGTGTTTGATTCAACTG
TTTTGTTTTAATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_30884.1	994	0.0	136 - 566	95	408 / 431	CUST_7477_PI390587928	ABC03237 ABC30667 ABC46432
AK356204	1760	9e-171	1301 - 1741	92	404 / 441	CUST_7477_PI390587928	ABC03235 ABC03237 ABC25388 ABC30667 ABC31592 ABC46432
MLOC_51552.1	733	2e-93	72 - 317	92	227 / 247	CUST_13519_PI390587928	ABC03237 ABC30667 ABC46432