barSeed - Barley Seed Development Database

Probe ABC41354

Source Contig ABC41354

barSeed

barSeed Home
List Cluster Sets
List Cell Wall Probes

Links

James Hutton Institute Home
BioSS Home

Affymetrix Source Sequence (392 bp)

>ABC41354 392
TCACCGGGCTCCTCTGGTCCTACGCGTGCCGGGGGTCGGCGGTGGGCGGCGCCGACGACC
CGAGGATGAACCCGCTGGCGCCCGGCGCGTCGCCGGCGCTGGAGAGGCTCGGGTGCGCGA
GGATGCTGGTGACCACGGGGCTCGAGGACGGGCTCGCGGCGCGCAACCGCGCGTACTACG
ACGCCGTGGCTGCGAGCGGGTGGCGCGGGAGCGCGGCGTGGCTGGAGCTGGAGGGGGAGG
GCCACGTGTTCTTCCTTGGGAAGCTCGAGTGCGACAACGCCAAGCGGCTTATGGATCGCG
TTGTGGCGTTCATAGCCGAGGCATGAGTTGGGCGTGTAAAATGTGCATCGCTCGAGCGTG
TTTGGTTGCCTTCTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_26035.1	778	0.0	85 - 462	100	378 / 378	CUST_8785_PI390587928	ABC13949 ABC41354
MLOC_59654.1	1605	3e-90	493 - 804	86	273 / 318	CUST_34314_PI390587928 CUST_38450_PI390587928	ABC13949 ABC41354
MLOC_59654.2	920	1e-88	445 - 756	86	272 / 318	CUST_34314_PI390587928 CUST_38450_PI390587928	ABC13949 ABC41354