barSeed - Barley Seed Development Database

Probe ABC40607

Source Contig ABC40607

barSeed

Links

Affymetrix Source Sequence (497 bp)

>ABC40607 497
AGGTGAAGGAGTACGAGCTGCTCAGGAGGAACTTCAGCGACACCGGGTGCTTTGGCTTCG
GTATCCAGGAGCACATCGATTTCGGCATGAAGTACGATCCATTTACTGGCATTTATGGTA
TGGACTTTTTCGTGGTGCTCGAGCGTGCTGGGTACCGTGTTTCCCCCCCCCGCAGGTGCA
AGGCCCGTGTCGGTATCCCCCAAAGGGTCCCCAAGGAGGACGCCATGAAGTGGTTCCAGG
TCAAGTATGAGGGTGTCATCCTCAACAAGTCCCATGCGAGCTAAGAAGGATGTAGCTATC
GCTAGACCTTGAGTTAATTAAGTTCACCTGGTTGCTGGATATGTATGTTACCTAGAAACC
TGCTTTGTCACTTTTTGCCTGGACTCAAGCTGGATGATTTCTGTTTGATCTGCACTTTCG
TTTAAAAGGCCCAGTCTGTTTTATTATCCTCTTCAACAATAGATATATGTTTGGGGCATG
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10588.1	931	0.0	1 - 389	97	378 / 389	CUST_10904_PI390587928	ABC01817 ABC01818 ABC01819 ABC37750 ABC40607
AK364348	2837	2e-82	338 - 620	86	244 / 283	CUST_132_PI390587928 CUST_23255_PI390587928 CUST_10921_PI390587928 CUST_37881_PI390587928	ABC01817 ABC01818 ABC01819 ABC02584 ABC06112 ABC33656 ABC35116 ABC40607 ABC52711
MLOC_36908.1	791	2e-82	81 - 363	86	244 / 283	None	ABC01817 ABC01818 ABC01819 ABC35116 ABC40607