barSeed - Barley Seed Development Database

Probe ABC01817

Source Contig ABC01817

barSeed

Links

Affymetrix Source Sequence (960 bp)

>ABC01817 960
ATCCCCTGCCGCCGCCGCCGCCGCCCCTCACCACGCTTTAAACCTCTCCCCCCTCCACCT
CCCCCTCTTCTCTCCCCCGCCGCCGCCGCTCCCCAGATCCCGCCGCCATGTCGACGGAGA
AGAAGCAGATGAACCCCATGCGGGATATCAAGGTGCAGAAGCTCGTCCTCAACATCTCCG
TCGGTGAGAGCGGAGATCGTCTCACCCGCGCCTCCAAGGTGCTGGAGCAGCTGAGTGGAC
AATCACCAGTGTTCTCCAAGGCGAGGTACACTGTCAGGTCTTTTGGTATCAGGCGTAATG
AGAAGATCGCGTGCTACGTTACTATTAGGGGTGAGAAGGCGATGCAGCTGCTGGAGAGTG
GCCTGAAGGTGAAGGAGTACGAGCTGCTCAGGAGGAACTTCAGCGACACCGGATGCTTTG
GCTTCGGTATCCAGGAGCACATCGATCTCGGCATGAAGTACGATCCATCTACTGGCATCT
ATGGTATGGACTTCTTCGTGGTGCTCGAGCGTGCTGGGTACCGTGTCTCCCGCCGCCGCA
GGTGCAAGGCCCGTGTCGGTATCCACCAGAGGGTCACCAAGGAGGACGCCATGAAGTGGT
TCCAGGTCAAGTATGAGGGTGTCATCCTCAACAAGTCCCATGCGAGCTAAGAAGGATGTA
GCTATCGCTAGACCTTGAGTTAATTAAGTTCACCTGGTTGCTGGATATGTATGTTACCTA
GAAACCTGCTTTGTCACTTTTTGCCTGTACTCAAGCTGGATGATTTCTGTTTGATCTGCA
CTTTCGTCTAAGAGGCCCAGTCTGTTTTATTATCCTCTTCAACAATAGATATATGTTTGG
CGCATGAGAAAAAAAATGACCTGCGTTTGTTTGATCTTCTTGTCCGGTTCAGCATCTGTT
AAATTTCAAAAAATTCACTTCCTAGCAGATGCTTGCAAGCACGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_10588.1	931	1 - 755	99	754 / 755	CUST_10904_PI390587928	ABC01817 ABC01818 ABC01819 ABC37750 ABC40607
AK364348	2837	78 - 620	88	479 / 543	CUST_132_PI390587928 CUST_23255_PI390587928 CUST_10921_PI390587928 CUST_37881_PI390587928	ABC01817 ABC01818 ABC01819 ABC02584 ABC06112 ABC33656 ABC35116 ABC40607 ABC52711
MLOC_36908.1	791	81 - 623	88	479 / 543	None	ABC01817 ABC01818 ABC01819 ABC35116 ABC40607