barSeed - Barley Seed Development Database

Probe ABC40201

Source Contig ABC40201

barSeed

Links

Affymetrix Source Sequence (412 bp)

>ABC40201 412
AGTAAAGATCAAGGCAAATGGTTTCATAGTTTTCGTACCGAAGTTTGGCATAAAAGGCCC
CATTTATTTTACGGCGAAGGGAGACAAAGGGGCTGATTGGGTAGTAAACGAGGTGCCCCA
GAAAGTAACCAAGCTTGGAACAAACATAAGTTATGCTGTGTTGCAAAGTGTTATGATCCA
TATGGAAGTGGTCGAGCCTCAGCCTCCCCGCCCAAAGTTACAGTTCCCCCTCATATGAAC
AACAAATGTCCAAATGAATTGTAACATTAGGGCATTCCCCCTTTTTCCGCTACGGCATTG
TACCAGGGTCCATTTTTCAATTCAACAAATTTTGGTGATTTTATGAAATTGTCAAATCAG
CCTGGAATTCCTTTTTACAAAGCTGTGTAAAAATTTTTTTATTGAGGCTAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_68937.2	3215	4e-179	2796 - 3207	94	388 / 412	CUST_20604_PI390587928 CUST_38202_PI390587928 CUST_34715_PI390587928	ABC10213 ABC40201
MLOC_68937.3	4028	4e-179	3609 - 4020	94	388 / 412	CUST_20604_PI390587928 CUST_38202_PI390587928 CUST_34715_PI390587928	ABC10213 ABC40201
MLOC_68937.1	3201	4e-179	2766 - 3177	94	388 / 412	CUST_34715_PI390587928 CUST_20604_PI390587928 CUST_38202_PI390587928	ABC10213 ABC40201