barSeed - Barley Seed Development Database

Probe ABC37229

Source Contig ABC37229

barSeed

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Affymetrix Source Sequence (400 bp)

>ABC37229 400
GCCCCCAAAAAATGGCTTTTGGGCTTATAAGTATCCCCTTGAAATGTGTGGGGCCACCCA
TGGGTGAGAACCACCCATTGCCAAAGAAACTGCCTCCTGCAACTCCGATTGGAAAGCTGA
AATCTTTGTGTGAGAGTTTCTTTAAACTGAAGGCCATCAAACTAAGATTATTTTTCGAGG
AAAAGCAGGGATGCCCCCTCCCCCAACTACTCAAAAAAAAAACGGCTTCGCTCGTGGAGC
TTGGGATAGGCCCAGGAGCACCCATAATCGTCGATAAAAAAAGCAAGTCTTTTGTTAGGA
CCAAAAAAAAGAGCATATGTATTTGTGTGCCCGGATCCCCCCCTATGATTCCTTTAAAAA
AACCAGTCTCCTTTTTTGTGTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK366202	1905	3e-145	1372 - 1755	91	349 / 384	CUST_255_PI415269222 CUST_36124_PI390587928 CUST_34959_PI390587928	ABC34524 ABC37229
MLOC_61514.1	1966	1e-143	1194 - 1577	91	348 / 384	CUST_255_PI415269222 CUST_36124_PI390587928 CUST_34959_PI390587928	ABC04419 ABC34524 ABC37229
MLOC_61514.6	2115	1e-143	1127 - 1510	91	348 / 384	CUST_255_PI415269222 CUST_36124_PI390587928 CUST_34959_PI390587928	ABC04419 ABC34524 ABC37229
AK363985	1712	1e-139	1301 - 1682	90	347 / 385	CUST_255_PI415269222 CUST_36124_PI390587928	ABC34524 ABC37229
MLOC_61514.5	2112	4e-139	1127 - 1507	90	346 / 384	CUST_255_PI415269222 CUST_36124_PI390587928 CUST_34959_PI390587928	ABC04419 ABC34524 ABC37229
MLOC_61514.7	922	2e-127	273 - 623	90	319 / 354	CUST_36124_PI390587928 CUST_34959_PI390587928	ABC04419 ABC34524 ABC37229
MLOC_61514.2	1487	1e-69	1296 - 1477	93	169 / 182	CUST_255_PI415269222 CUST_36124_PI390587928	ABC37229
MLOC_61514.3	1484	3e-65	1296 - 1474	92	167 / 182	CUST_255_PI415269222 CUST_36124_PI390587928	ABC37229