barSeed - Barley Seed Development Database

Probe ABC24975

Source Contig ABC24975

barSeed

Links

Affymetrix Source Sequence (1030 bp)

>ABC24975 1030
GCTTTTTGATTTTTGGCAAATGGAGCAGATTATGAAATCACATATTTCAATTAGTTTTTG
GTCTGTCAGCTTGAGTAGTAATTCTTTATAGTGTCCCAGTTTTTATTTCATATAGGGTAC
CTTGCTATGGTGCAAGGGACTATAAGATACTTCATATAGGAGGTCGAGCCTAAAAAGGTA
CAATCATGTTAATCAATGTGTCATGATATCGTTCCTGCTTCAAAATGCACCCTGGGGTGT
TAGTTAACAGTCCTCTAAATATTGATTTTCTGTTACAGAATTTGTCCATTTGTGCAGGCT
TTCATTCATGATGGGCCAACCTTGAAGTCTTAACGATTACCCTTTCCAACATGCAACACT
CGCGATGTGGTGCTTAATCCTGCTAATTTTTTTGTCTATTAATTTTTATGTTTTTTTCAC
CTCAGATATTGTATTAATTTAGGTTGGGTTCTAACTAGAGATGCACATAAATAACTTGGT
TCTCGGTATCATAAAACAAACAAGGCACAAACCTAGAAGGTTATTGATTATATGTTGTAA
CCCATTTAATTAAGCTGGTTTTCTTGACACCATTTTCTATTGTAGGCTGTTGAATATATA
CAGTTTTTGCAAGAGAACGAACAGAAGTGTGGTTGGGTGAGATGCCCTTATGAATCAGGA
CCATCGACCATTGACCGAGAAAAACCAAGAAGGCAAATGATTCATAAGAGCATCGCTGCT
ATGAACGTCGTCTAATCAGTTAGTGTAACCATCGACCGAGAGCTGAGATTGGTGTTGAAT
TTTGATATGCGATGACATCTCCAGGGATGATGATACCTTTTCGTGTTTGATCTTTTCTTT
ACATACTACAACCACTGTAGCACTCAGCACCTTTTCAAGATTCTGGAGGATAGTTCTGTT
TCTTGCCTTGCCTATTTGATCTGTGTTTTTATCAGGATGAATTACTCGAGGTAATGTGCC
TTGGTGGTGTATGTGTATGTGTATCTTTATGTCGATGTTGTGTCAGACTATAATGTTTTT
GTTAAATTTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_29330.3	1354	0.0	442 - 1351	98	889 / 910	None	ABC10099 ABC24975
MLOC_29329.1	1440	0.0	449 - 1088	99	634 / 640	CUST_6863_PI390587928	ABC24975
AK354276	2606	0.0	1790 - 2432	97	622 / 643	CUST_6863_PI390587928	ABC06509 ABC18516 ABC24975
MLOC_26223.1	996	0.0	383 - 996	95	587 / 615	None	ABC24975
MLOC_34114.1	555	0.0	106 - 495	99	390 / 391	None	ABC10099 ABC24975
MLOC_29330.1	1026	0.0	450 - 818	98	363 / 369	CUST_6863_PI390587928	ABC24975
MLOC_29330.2	889	0.0	449 - 817	98	363 / 369	None	ABC24975
MLOC_40578.1	746	0.0	184 - 579	96	382 / 398	None	ABC10099 ABC24975
MLOC_970.1	721	3e-159	376 - 721	96	333 / 346	None	ABC24975
MLOC_29478.1	338	2e-150	1 - 338	95	322 / 338	None	ABC24975
MLOC_25914.1	339	1e-123	73 - 339	97	260 / 269	None	ABC10099 ABC24975
MLOC_26221.1	604	3e-74	376 - 551	95	168 / 176	None	ABC24975
AK365134	1728	2e-71	1554 - 1724	95	163 / 171	CUST_6509_PI390587928	ABC10099 ABC24975
MLOC_35190.1	698	1e-68	1 - 163	96	156 / 163	CUST_6509_PI390587928	ABC10099 ABC24975