barSeed - Barley Seed Development Database

Probe ABC19513

Source Contig ABC19513

barSeed

Links

Affymetrix Source Sequence (632 bp)

>ABC19513 632
GCTTGGGCTATACAATAGATGCTGCAAAGTGCGGTAATGTTGGAAGATTCATCAACCATA
GCTGCTCTCCAAACATGCATGCACAGGATGTTCTGTGGGACCATGATGACAAGAAGATGC
CGCATGTTATGCTTTTTGCTGAAAAGAATATCCGTCCGCTACAAGAGCTTACTTACGATT
ATAATTATAACATAGGTAATGTGCGTAAGAATGGCAAGGTGAAGGAGAAGAAATGCTTTT
GTGGTTCGTCGAAGTGCCGCCTCAGACTTTACTAAGGTATTGGTGACTGGTGATGGTAAT
GTTCATTATTCAGCGGAGTGCAGTCCTGTCAGCGCAGTGCTCCTTGGTTTTACTCTCCCG
GCCACCTTGCAGTTGTCGATGACTTGTGATGTTGTTTTTCTTGGTACCCTAGCGTTGAAT
TAGTACTGCTTTTTAAAGAGCTGCATTAACTCTTTCTTTTTTTCTTGTGTGCCAGACTCA
AAGAGTTGTATTCTGCTGTTAGTTTTATTTTCAGAACCGAACCTGTACTGGGTACATGAG
TTCTAGCTGTAGCTTTTCCATCACAAATTTTACCCTGCGCAAGCGGGAGCTACGTGCATT
GGGCTGCCCTTTTAACCNAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_32627.1	2785	0.0	2180 - 2785	100	606 / 606	CUST_25422_PI390587928 CUST_24820_PI390587928 CUST_10970_PI390587928	ABC19513
AK374053	2545	1e-60	1698 - 2078	78	299 / 382	CUST_22060_PI390587928	ABC17850 ABC19513 ABC34639
MLOC_59632.1	4059	1e-60	3060 - 3440	78	299 / 382	CUST_71_PI390587928 CUST_39109_PI390587928	ABC17850 ABC19513
MLOC_59632.2	4173	1e-60	3174 - 3554	78	299 / 382	CUST_71_PI390587928 CUST_39109_PI390587928	ABC17850 ABC19513