barSeed - Barley Seed Development Database

Probe ABC15904

Source Contig ABC15904

barSeed

Links

Affymetrix Source Sequence (527 bp)

>ABC15904 527
TCTATTCGCGTATGGGACGGCAAATCTGGCAAGGTAGCTGGGCTATCCGCTCTTGGCATT
CCCCTCAGACTCGTTATGCTCAGTTCACCTTTGAGGTCATGTCTCTATTGATTCCTGCAT
TACGTGTGGCGGTTGAGTTCTGCTGCCTGTTCAATTGGGGATTAACTCTGGTTGCTTGAG
GTGGTTGATGTGCCGATGGGCTCAAATTGTGCATCGTCTATGATGGTTGATGTGTGCTGA
CTGCTTGATCAACTGAGGAGCTCCTCTAATTCCTCAGTGCGCCTGATGTACCCGTTGGTT
CAGATCAGGTTGTCATTTGGCACGCCTGGGGTTGAGGACATGTCAGATTGATTTGCTTGG
AGGCTTTTCGCCTGTTTGTCGTGATCAGTGTACACCGGATCAGTTTCGGGAGGCGATCAG
GCTGGTTACCTGATAGGCAAAACTCTCTGCGGTTAAAGTTGCACACTGATTGCCAGATGG
CCATATGTTTAATAGCAAGAAAAAAAGAGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK369855	3636	0.0	661 - 1181	99	515 / 521	CUST_14496_PI390587928	ABC04481 ABC15903 ABC15904 ABC49813
AK366092	2177	0.0	652 - 1172	98	510 / 521	CUST_14496_PI390587928	ABC04481 ABC15903 ABC15904 ABC49813
MLOC_28682.1	1439	0.0	1 - 466	98	457 / 466	CUST_36855_PI390587928 CUST_26571_PI390587928 CUST_14496_PI390587928	ABC15903 ABC15904 ABC49813
MLOC_28682.2	1325	0.0	1 - 466	98	457 / 466	CUST_14496_PI390587928 CUST_26571_PI390587928 CUST_36855_PI390587928	ABC15903 ABC15904 ABC49813
MLOC_28682.3	1589	0.0	1 - 465	98	456 / 465	CUST_36855_PI390587928 CUST_14496_PI390587928	ABC15903 ABC15904 ABC49813
MLOC_28682.4	1672	0.0	1 - 465	98	456 / 465	CUST_36855_PI390587928 CUST_26571_PI390587928 CUST_14496_PI390587928	ABC15903 ABC15904 ABC49813
MLOC_28682.5	1703	0.0	1 - 465	98	456 / 465	CUST_14496_PI390587928 CUST_36855_PI390587928	ABC15903 ABC15904 ABC49813
MLOC_28682.6	1247	0.0	1 - 464	98	455 / 464	CUST_14496_PI390587928	ABC15903 ABC15904 ABC49813
MLOC_28682.7	1774	0.0	1 - 461	98	452 / 461	CUST_36855_PI390587928 CUST_26571_PI390587928 CUST_14496_PI390587928	ABC15903 ABC15904 ABC49813
MLOC_30258.1	441	2e-142	1 - 301	97	292 / 301	None	ABC15903 ABC15904