barSeed - Barley Seed Development Database

Probe ABC15789

Source Contig ABC15789

barSeed

Links

Affymetrix Source Sequence (769 bp)

>ABC15789 769
AAAGGAGGTACACAGAGATCGACAGTTTATTCGGCCAGAAGTATGCAGAACATACAACTT
TGGCGAGCATGGATCAAGCATGGGACAATTCTTCGATCAATACTTGAAACCAATCAAGTT
AAATGATGCTCATATTGACTGGAATTCCGAGGACCTGAGCTACCTCAAGGAGGACAAGTT
TTTAACCAAATTCGGAAAAGACGTGGCTAGCGCCACACCTGTGCATGGATCCGATGCTTT
GTTGAAGGCCCACAATCTGGATGTGGACGTAAGGATTCAGTATGACAACCAGGGTGATTT
CGAGCGTATAGCTCGTCAATTTGGAATATTTGAAGAATGGAAGGACGGTGTTCCACGGGC
GGCTTACAAAGGCGTGGTGGTGTTCCGGTACAAGAGCAGCCGAAGACGGATATACCTGGT
GGGCCCTGACTCTCTTCGCCAACTTGGGGTTTAGCATAGTGTTGCCAAGGTTGGGAAATC
TGTCAACATGGGGAAGTTGACACCCTGATGTAGCAAAACACTGAATGATAGGGTGCAAAT
TCAATGCACAGTTGCCAAGGATATTTTTCCTTTTATGATGGATGGATGATGGGTGTTTAT
TTCGCCCTCGAGTCGAGGTCTCGTGGGGTTTCGCCGTCCGTCTACAGTCAAGGAGGGGAT
AGAGTAGAGTAAGAGCAAGGGAAGAAGAGCGCACGGTGACGAGAATCGCAGAGATAAACT
ATTTGGCTGGGATTCATTCATCCATGTGTGTGTGGGTGTAGTTAGTAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK248762.1	1793	0.0	908 - 1677	99	768 / 770	CUST_35043_PI390587928 CUST_120_PI415269222 CUST_121_PI415269222	ABC15789 ABC19664
MLOC_16752.1	1331	0.0	66 - 835	99	768 / 770	CUST_120_PI415269222 CUST_121_PI415269222	ABC15789 ABC19664
MLOC_16752.4	1364	0.0	4 - 773	99	768 / 770	CUST_120_PI415269222 CUST_121_PI415269222	ABC15789 ABC19664
MLOC_16752.3	1488	0.0	8 - 777	99	768 / 770	CUST_35043_PI390587928 CUST_120_PI415269222	ABC15789 ABC19664
MLOC_16752.2	1492	0.0	66 - 835	99	768 / 770	CUST_35043_PI390587928 CUST_120_PI415269222 CUST_121_PI415269222	ABC15789 ABC19664
MLOC_16752.5	1350	0.0	1 - 596	99	594 / 596	CUST_35043_PI390587928 CUST_121_PI415269222	ABC15789 ABC19664
MLOC_19196.11	1076	2e-180	522 - 998	91	434 / 479	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.2	1383	2e-180	528 - 1004	91	434 / 479	CUST_1956_PI390587928 CUST_121_PI415269222 CUST_23193_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.1	1149	2e-180	532 - 1008	91	434 / 479	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.7	1115	2e-179	590 - 1044	92	417 / 455	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.9	1293	2e-179	518 - 972	92	417 / 455	CUST_1956_PI390587928 CUST_16161_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.6	1320	2e-179	528 - 982	92	417 / 455	CUST_1956_PI390587928 CUST_121_PI415269222 CUST_23193_PI390587928	ABC15789 ABC18549 ABC19664
AK374062	1766	2e-174	951 - 1424	90	431 / 479	CUST_1956_PI390587928 CUST_121_PI415269222 CUST_23193_PI390587928 CUST_19673_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.4	1328	1e-137	610 - 953	92	318 / 344	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.13	1530	1e-137	588 - 931	92	318 / 344	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.5	1420	1e-137	528 - 871	92	318 / 344	CUST_1956_PI390587928 CUST_121_PI415269222 CUST_23193_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.8	1530	1e-137	543 - 886	92	318 / 344	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.15	1542	1e-137	544 - 887	92	318 / 344	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.3	1580	1e-137	532 - 875	92	318 / 344	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.14	1568	1e-137	582 - 925	92	318 / 344	CUST_1956_PI390587928 CUST_121_PI415269222 CUST_23193_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.10	1481	1e-137	571 - 914	92	318 / 344	CUST_1956_PI390587928 CUST_121_PI415269222 CUST_23193_PI390587928	ABC15789 ABC18549 ABC19664
AK371466	1960	1e-131	964 - 1304	92	315 / 344	CUST_37866_PI390587928 CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
AK249758.1	1754	5e-131	915 - 1254	92	314 / 343	CUST_1956_PI390587928	ABC15789 ABC18549 ABC19664
MLOC_19196.12	1903	3e-58	1131 - 1304	90	157 / 174	CUST_1956_PI390587928 CUST_121_PI415269222 CUST_23193_PI390587928	ABC15789 ABC18549 ABC19664