barSeed - Barley Seed Development Database

Probe ABC15197

Source Contig ABC15197

barSeed

Links

Affymetrix Source Sequence (910 bp)

>ABC15197 910
CAGAAAATGGAGTTATCAAGTCCATCTGGGCTTATAGTGGACATTACAAACCGAGTGCGG
AGAATCTTAGCAACTTCATGAGTTTTCTAGAAGAGAATGGAGTTGATCTGAAAGAAGTTG
AGGTGCGCTCATCCACCAAGGAAGACTATTATGAAGACCCATCGCTTAATAGCAAACAGA
ACCCTGCTGCTGCTATCATGCCATCCAATCCTCCGCAGTTGATTCTCCCTTCCAACATGG
TGGAAGAAGGCAAGGCATCTGGGCCATCTTCTCAGACTGAAGCTGACGAGGGTGATAATC
TCCGTATGGAGAAAGCAAGGCCAGCCTACCAAAGAACCTTATCAGGTGGCCTGCAAAGCC
CTAGAGATGCCGGCGTCTCGCAGGATGCAATTCTTGAGAGGGTGAACTCCAAGAGCAAGT
CAAAATCCTATCAGCTCGGCCACAGGCTATCCCTGAAATGGAGCACTGGAAATGGTCCAA
GGATTGGGTGTGTGAAGGATTATCCAATAGAGCTCAGAATGCAAGCGCTGGAGATGGTAC
AGCTCTCGCCAAGAGCATCGACTCCTCCAGCCTCGTGGAGGGTGTCGTCATGCCTCTCCC
CCACCTCGCCAACCTCGCCGCTCGTGACAATACAGGCCTCCCTGCCCCAGCCAAGTTAGG
AACTTGAGTCTAGGCAATAGCTGTGTAGTTCTGCTGCTTCATGTTTGATGGGTGCTGCAA
AGGTCAAAGTTTGTGCTTGCTGTATTTCCTGTGTTCCTTGAATCCATTCGTAGCTCAGAT
GGATCTGGTCAGGATTGTATGAGTTCGAATTTGGTTGAATCGAATTGAGAATGTGTGATT
GCGCTTGCGCCTTTTCCCACCAAATGTCACTATTGCAGAAATAGCTTCAGCAGAAAAAAA
AAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_37774.2	1777	0.0	918 - 1777	100	860 / 860	CUST_8474_PI390587928 CUST_14359_PI390587928	ABC15197 ABC18490 ABC30030
MLOC_37774.3	1934	0.0	1075 - 1934	100	860 / 860	CUST_8474_PI390587928 CUST_14359_PI390587928	ABC15197 ABC18490 ABC30030
MLOC_80445.1	2114	0.0	1162 - 2050	90	802 / 896	CUST_14360_PI390587928	ABC15197 ABC18490 ABC30030
MLOC_80445.2	1625	0.0	753 - 1625	89	787 / 880	CUST_37059_PI390587928	ABC15197 ABC30030
MLOC_37774.1	1559	4e-77	1403 - 1559	100	157 / 157	CUST_8474_PI390587928 CUST_14359_PI390587928	ABC15197 ABC18490