barSeed - Barley Seed Development Database

Probe ABC15050

Source Contig ABC15050

barSeed

Links

Affymetrix Source Sequence (1009 bp)

>ABC15050 1009
TTCTACGACGGCCGCAACAAGGGGCGCGTGCTGTGGGCGTGGGTGGACGAGAACGACGGC
GGCGGCGTCGCCAGAGGGTGGGCCGGCATCCAGGCGTTCCCGAGGGCGATCTGGCTGGAC
GCCGACGGGAAGCGGCTGGTGCAGTGGCCAATCGAGGAGATAGAGACGCTGAGGAGGAAG
CGCGTCGGCCTGCAGTGGGCGACGGAGGTGGAGGCCGGCGGCAGGAAGGAGATCGCCGGC
ATCGTGAGCTCGCAGGCGGACGTGGAGGCGGTCTTCGAGATACCGAACCTGGAGGAGGCA
GAGACGCTGGACCCGAAGTGGCTGCAGGACCCCAAGGGGCTGTCCGCCGAGATGGGCGCC
TCCGGACACGGCGGAGTCGGGCCGTTCGGGCTGCTGGTCTTGGCCTCCGGCGACCTGGAG
GAGCACACCGCCGTCTTCTTCAGGGTGTTCAAGCACGATGGCAAGTACAAGGTCCTCATG
TGCACCGACCTGACAAGGTCGTCGAGGAAAGAGGGGATAAACAAGCCATCCTACGGCGCA
TTTCTGGACGTGGACGTGGAGAAGGACAGGAGCATCTCGCTCAGAACACTGATCGATCAC
ACGGTGGTGGAGAGCTTCGGCGACGGCGGGAGGACGTGCATGACGGCCAGGGTGTACCCG
GAGCACGCCGCGACGGGCAGCAGCCGGCTGTACGCGTTCAACTACGGCGCCGGCGCCGTG
AAGGTGTCCAAGCTCGAGGCGTGGGAGCTGGCGACGGCGGCCGTCAACGGCGGGGGCGCT
ATGTAGCTTGGTTGCGTCGACACTGATGCATGATTTGGAGCCAGCTCGAGTGTGAATTTG
TGGTGGTTTTAACCTATATTGTTGTTCAATAATGAAACATTCTTCAACAAAAATAGAGAT
GAAAAACAACAGCCGTGTCGGCGATCTGTCGGTGAATTTTGTGTAACCTTCCCCTTTGTT
ATTTTGCATTCACGTACGGATGTGGACTTTTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_80162.3	2053	0.0	944 - 1934	99	990 / 991	CUST_20959_PI390587928 CUST_1136_PI390587928	ABC04470 ABC15050
MLOC_80162.1	2157	0.0	1085 - 2075	99	990 / 991	CUST_20959_PI390587928 CUST_1136_PI390587928	ABC04470 ABC15050
MLOC_80162.4	1897	0.0	963 - 1897	99	934 / 935	None	ABC04470 ABC15050
MLOC_80162.2	1948	3e-144	1671 - 1948	100	278 / 278	CUST_20959_PI390587928	ABC04470 ABC15050
MLOC_56214.1	774	0.0	1 - 774	88	680 / 774	None	ABC15050
MLOC_66871.1	1754	5e-147	196 - 970	79	617 / 780	None	ABC04470 ABC15050
AK364085	2091	1e-143	1158 - 1932	79	615 / 780	None	ABC04470 ABC15050