barSeed - Barley Seed Development Database

Probe ABC15016

Source Contig ABC15016

barSeed

Links

Affymetrix Source Sequence (624 bp)

>ABC15016 624
GCACGAGGCAAACGGCCGCTTCCAGTCAGTTGGATCTGATCTTACCCGCACACGGGAGCT
ACCGGAGCAGCAGCAGCAGCAGAATAACAAAGACCCAAGCAGGACTCCCACCAGCAATCG
CGAGCCGGCTACGTCCCTGGAGAGTGGGGTGCTCGGGCAAAGGACCAGGAAGTCTCTGGC
TGGCAACGAGTCGATGTGCACGCCGGACAAGCGGACCAGGAAGACCAGCATGGTGAAGGA
GCCGATCCTCCAGCAGGTCAAGCGGCAGAAGTCCGTGGTTCAGTGAGGCGGCACGGAACC
TCAAGGAGCCTCAGCGCAACTAACATCGTAGGTCAGGCGAAGAAGCAGATATCCACCCCT
AGTTCAGTACTTCAGTTCGTTGGTTCAGGTGCTTGAAACTTGTGAAGATAGCGACGACGG
AGCACCCCCCGGCAGATGTAGATCCTTGTCCCTAGCTCTATCCTTGGTAGCAAGACGTAA
ACGAGAGAGATGTGTGCCCCCTGAGACGTGTTGTTCGTGATGTTTGTTTCACGGGAGACT
GTACTGAGACCATTTTTGCCTGAATGCTGGAACGTAGCATCATTTATATATGTATTCGTC
ATTAGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_12052.1	2653	0.0	405 - 1008	100	604 / 604	CUST_41340_PI390587928	ABC15016
MLOC_12052.2	2107	0.0	1 - 568	100	568 / 568	None	ABC15016
MLOC_12052.3	2401	0.0	1 - 546	100	546 / 546	None	ABC15016
MLOC_33237.2	1280	2e-63	552 - 713	94	152 / 162	None	ABC08031 ABC15016