barSeed - Barley Seed Development Database

Probe ABC14994

Source Contig ABC14994

barSeed

Links

Affymetrix Source Sequence (655 bp)

>ABC14994 655
GCACGAGGGCCTTGAGGTGCTACTCATCTACTGCTGCAATCATAGTCCCAAGGAGGAAGA
TCTGCGCAAGAGCTTCCATGGATGGCTGCTCCAGTTCCGAATCGAGGCGAGCTTCTAGTT
CGGTCAGCGTCACCTGCAAGGTGCACAAGGTTTATGAAGACAAAAACATGGGCATCCTCT
GTTACACCGACGAGAATGGTGAATTGGTGTGCGAGGGCTTGGATGAAGGCCCGAGACTAA
CGCGGCGAGATATGGAGAAATTGACCCGAGAGAGAGAACCGAAGAGCACGGCAGAAGATT
GGCGGGAGAGAGCGCTGCGGTTCGCGGGTGGGGTCGACTGGAGCGGCCTCCAGCCTGCTG
CTGGCACGGCAAAGGAGACTGGAAGCTGGCTTCAAGCTTAGCCGGCCCGTAGATCCATGA
ATCTCGTGGTGATGTCTCTTCAAGTCTTCGTGGAAACGCTGTCTGTTACTGTTATGCGTA
GATCGATCCCCATGGTTGCTTGCTTGATCTGTATGTACAATAAGGATCTTATTACTTGTA
GGTAGGAAGTAAGGATTGGAGAAGGCTGGAGGCTGATCAACTCCTACTCTTTTTGTTTCA
CTCTCTGCTGAATAAGAAATGATTCAGACTCAAAAAANAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_7150.1	3056	0.0	238 - 861	100	624 / 624	CUST_465_PI390587928 CUST_6540_PI390587928	ABC10669 ABC14994
MLOC_7150.2	2524	0.0	238 - 861	100	624 / 624	CUST_465_PI390587928	ABC10669 ABC14994
MLOC_7150.3	2084	0.0	7 - 595	100	589 / 589	CUST_465_PI390587928	ABC10669 ABC14994
MLOC_7150.4	2662	0.0	1 - 562	100	562 / 562	CUST_6540_PI390587928	ABC10669 ABC14994
MLOC_7150.5	2131	0.0	1 - 521	100	521 / 521	None	ABC10669 ABC14994
MLOC_7149.1	333	5e-175	1 - 333	100	333 / 333	None	ABC14994