barSeed - Barley Seed Development Database

Probe ABC14390

Source Contig ABC14390

barSeed

Links

Affymetrix Source Sequence (787 bp)

>ABC14390 787
GAGCCAAAAGCATGAGCTGAATGTATCCACTTACCAGATGTGTGTTCTGATGTTGTTTAA
CTCTTCTGATGGACTTACCTACAAAGACATCGAGCAAGCTACAGAGATACCTTCCACAGA
CCTAAAGAGATGTCTCCAGTCTCTTGCTTGTGTCAAGGGGAAGAATGTTCTCCGTAAAGA
GCCCATGAGCAAGGACATATCAGAGGATGACACATTCTTCTTCAATGACAAGTTCACAAG
CAAGCTTGTTAAGGTGAAGATCGGGACAGTGGTGGCGGCAAAGGAATCTGAGCCAGAGAA
GCAGGAGACCCGCCAGCGGGTTGAGGAGGACAGGAAACCTCAGATTGAGGCCGCCATCGT
GAGGATCATGAAATCTAGGAGGGTCTTGGATCATAACAGTATTGTCTCCGAGGTCACCAA
GCAATTGCAAGCACGGTTCTTGCCAAACCCTGTTATCATAAAGAAACGCATAGAATCTCT
GATCGAGCGTGAATTCTTAGAGAGGGACAAAGCAGATAGAAAATTATATCGCTATCTTGC
ATAAAAGGCCACCATGTGAATGCTAAGATATTTCATGAGCAGGTGGCTTCCTTGTATTCC
TGTAAACATTTCCCCTTGTGCTTGAGTTCAGTTTTATTTTGTTGGGCACTGTCCACTGAA
ATCAGTAGCAGTTGTTAAATTTGGTTATCGATCGATTCAAATGTGGACTTTACCCCAATC
CCTGCAACCTGTCTACTAGACAAGCATTCATGTTATGCACACTTTTGTGCATTCCAAAAA
AAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70556.2	3216	0.0	2220 - 2997	99	777 / 778	CUST_41969_PI390587928 CUST_11058_PI390587928	ABC05119 ABC14390
MLOC_70556.1	2510	2e-160	2204 - 2510	100	307 / 307	None	ABC14390
MLOC_62398.1	6168	6e-105	355 - 891	80	430 / 540	CUST_28409_PI390587928 CUST_28408_PI390587928	ABC05119 ABC14390
MLOC_62398.2	2554	6e-105	135 - 671	80	430 / 540	CUST_28408_PI390587928	ABC05119 ABC14390