barSeed - Barley Seed Development Database

Probe ABC14383

Source Contig ABC14383

barSeed

Links

Affymetrix Source Sequence (1333 bp)

>ABC14383 1333
GCTCCTCTCTCTCCCCCGTGCAGCGAACCCTAGCACTCCCCGATCCAGATCCCTCCCCTC
CTCATCCCCTCGCCGCCATCCACCGCCGCTTGTCGCCCTCCACCGCCACTCTGCCGTTGC
ACCGCACCGCCCCGCCTGCCCGCCTGACCGCTCTGCCTGCTACTGCTACTGCTACCTGCA
ACTACACCCACGCCACACCCATCCCTCATCCTCCTCCACTTGTTCCGGTGGTACCACTCG
CTCGGAGGCTACAGCAAGAGCTATAGCCCGCGCGCGCAGGCCTGTTCCGCCATGGTGTAC
CAGTACCACCACCACCAGGACCATCCGCTGGGGATGGACGGTGTGGCGGCGGCGGCGGGG
AACCCTAGCGGTGTCGTCACGGTGAACAGGCGGACCAACGTGTGCCCACTTCTGCATCGG
CAGCTTCACCAGCTCAACCTCACCGTCACAAGAAGAATTAACCTGGGAAGCAAATGGAGC
TTATAGGGGCCAAATTGTTGTTGGCAGTGTCTATAGAAATCTTGAACAAGTGTTGCTGGG
AGACTAATTCAGTATGCTTTGCAGGGTGTAGCCTGATGTAGAGAACCATGGCACTTTTGG
TGGGTTGGTAGTCGTTTGCTCTCCTTTTGATGACACACGTTTTGTGTGTAAACATAATAA
AATAATACATTATCAAATACTATCTAGATAATAGCACCAAAACAATTGCACAACCGTTGT
TCCCCGACCTCTCTCTCCCTGAGTTCCCACTACCTCCGGAAGCGGCATGTACCATGTTCC
TTTCACTCTGCAAATCCCAACCTTGGTTGTGCATTGAGGTGAATTCACAACGTGACATGT
CCAACTGATTTTTATTAGAAACCAAACCCCGTGCGGCGAGTCGACGAGGTGCCGCTCGAT
GATGACGGCTGCGACGACGCCCTTGAGACCGACGGGCGGGGCATCGGGGACGACGACCCC
TTCGACATCCCCGCCAAGCGCGCGCCCGTCGAGAGGCTATGGCGGTGGAGGGTTGTTATG
ACGCGAACAAGCTGCTGTTGCAGGTGGACGACTGCTCATGGCTGCTCAACCTATCTCTCC
TACCCCCACACGTGATGCTAGGCTTTCATGTTTCTTCGCAAGCATCATGACAAAGAAGAA
GAAGCATAGTTCAATGGATCTAGTTATGGGAGTAATGAAGCCCATATGATGCTTCATTAC
TATACACTTGTAGAGCTATTTGTTTGATTGTGAACTTAATGCTTGTCACATTTATATGTG
TTCTATTATGTAAAAGATTGCTATTTGCTATTGTTTGAAGTATTGTGTTTGTTTTTAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_2155.2	260	8e-96	1 - 260	91	238 / 261	CUST_31058_PI390587928	ABC08690 ABC14383 ABC34750 ABC49709
AK374494	1004	1e-89	729 - 1001	89	247 / 279	None	ABC04350 ABC08690 ABC14383 ABC34750 ABC43884 ABC49709
AK357400	1526	8e-86	1136 - 1359	92	208 / 225	CUST_6730_PI390587928	ABC08690 ABC14383
MLOC_75750.1	579	1e-68	1 - 224	88	201 / 229	None	ABC14383 ABC34750 ABC43884 ABC49709
MLOC_66191.1	221	9e-66	1 - 185	91	169 / 185	CUST_31058_PI390587928	ABC08690 ABC14383 ABC49709
AK358211	1267	2e-56	33 - 259	85	198 / 233	None	ABC04741 ABC04743 ABC14383
MLOC_32160.1	332	1e-54	177 - 332	92	143 / 156	None	ABC08690 ABC14383
MLOC_25667.2	317	7e-52	176 - 317	93	132 / 142	None	ABC08690 ABC14383
MLOC_26278.1	1492	2e-51	1349 - 1492	92	133 / 144	CUST_17574_PI390587928 CUST_34665_PI390587928	ABC14383
MLOC_2155.1	232	9e-51	1 - 149	91	137 / 150	CUST_31058_PI390587928	ABC08690 ABC14383 ABC49709