- Probe ABC08690
- Source Contig ABC08690
Affymetrix Source Sequence (1402 bp)
>ABC08690 1402 GCGATGATGACGGTGCGACGACGCCCTTGAGGCCGACGGCCGGGGCACCGGGGACGACGA CCCCTTCGACACCCCCGCCAAGCGCATGCCCGTCGAGAGGCTATGGCGGTGGAGGGTTGC TATGACGCGGACAAGCTGCTGCTGCAGGTGGACGACTCCTCATGGATGCTCAACCTATCT CTCCTACCCCCACACATGGTGAGCTCTACTTCGTCTTTCTACCCATGGAGATCTGATGTG ATGTGCACAAAATACTTGCAATTGTTCTCGATACAACACCCCATCACGTCTTGGTCTATT CGGATGTGCAATTTCATTGCTATTGTGTTGTTTGATGCTTGCTTCGCAAGAGGGAAACCA TGGATATAAGTTGAGCTTCCTTTTAATTTTATAGTAATACTAATCATTTGGTTCCATTTT CTCTGCTGCTAGTATAGTTTGCTGCTACAGTAATCTCATTGTGATGAACTCTGCAATAAC CAGTTTTCTCATTACACTGATGATGCAAGGTTTCTCCTCCTGCTGCTGCTGCATGTCTTC ATCGACTTAGTTCTTCCACAGGAAGAGATATAAATCCTATACTGTTCACTGTGTAATCTG CAGATTACTTCTTCCATTAATCATCTAGTGCTCCTATTAGTGAGATTCATCTAGTATTTT TTTGCAAAGCATGCAATGGTTTGGAGTACTTGATCATGACCTCATGAAACCTACATGTCG TTAGCATGTATATATATTAAATGCATTAAATCTGGTTAAATGCATTCTACTACAACAACC AGAAGCAATCCATTTTATTAAATGCATTCTGGTTAGGATTTGGTCATAGCATCACCTTGC TGTTCTGTTTTAAATCTGGTTGCAAGTTATTATTTTTCCAGAACCAACATCTTACATTTC GGGCATTGGAATTTAGGATTTTTTGTATAATTTTAGTTCTGGATGTGTCCAATGCAAACA TTACTGTGAGCTGACAAATTGATTCTAAAATGTCATATTAACTTTATTTCAGATGGTGAT TTCTAGATTTAGTACCAATTTATTGTTGCTCTGGCCTATGCATTGTACCTTGCTCTGTAC CAACTTATTGCATTATTTGTTATTTACTGTTAAATATGCTGTTAGATTATTTTTATTTTG TTGCTAACCATTTTGTTGTATAACAATGAGATGCTAGCCTTTCATGTTTCTTCACAAGCA TCAGGACAAAGAAGAAGAAGTATAGTTCAATGGATCTAGTTCTCGGAGTAATGAAGCCCA TGTGATGCTTAATTACTATACACTTGTAGAGCTTTTTATCTGATTGTAAACTTAATGCCG ATCACATTTATATGTGTTATATTATGTAAAAGATTGCTTTTGCTGTTATTTGAAGTATTA TGTCTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_41293.1 | 908 | 0.0 | 1 - 905 | 95 | 866 / 914 | CUST_12292_PI390587928 | ABC08690 ABC49709 |
| MLOC_41293.2 | 787 | 0.0 | 1 - 714 | 94 | 680 / 723 | CUST_12292_PI390587928 | ABC08690 ABC49709 |
| AK357400 | 1526 | 3e-160 | 1163 - 1526 | 95 | 346 / 365 | CUST_6730_PI390587928 | ABC08690 ABC14383 |
| MLOC_32160.1 | 332 | 8e-151 | 1 - 332 | 96 | 319 / 333 | None | ABC08690 ABC14383 |
| MLOC_25667.2 | 317 | 4e-144 | 1 - 317 | 96 | 304 / 317 | None | ABC08690 ABC14383 |
| AK367337 | 1893 | 4e-119 | 624 - 979 | 88 | 320 / 362 | CUST_201_PI390587928 | ABC01983 ABC08690 ABC10695 ABC12724 ABC21919 ABC22344 ABC45186 |
| MLOC_72499.2 | 1521 | 4e-119 | 503 - 858 | 88 | 320 / 362 | None | ABC08690 ABC12724 |
| MLOC_72499.1 | 1372 | 4e-119 | 514 - 869 | 88 | 320 / 362 | None | ABC08690 ABC12724 |
| MLOC_25667.1 | 715 | 1e-118 | 1 - 256 | 97 | 248 / 256 | None | ABC08690 |
| MLOC_66191.1 | 221 | 4e-89 | 1 - 221 | 94 | 208 / 222 | CUST_31058_PI390587928 | ABC08690 ABC14383 ABC49709 |
| MLOC_41083.1 | 200 | 2e-87 | 1 - 197 | 96 | 190 / 197 | None | ABC08690 |
| MLOC_48979.1 | 187 | 3e-80 | 1 - 187 | 96 | 180 / 188 | CUST_31058_PI390587928 | ABC08690 ABC49709 |
| MLOC_2155.2 | 260 | 3e-76 | 1 - 177 | 96 | 170 / 177 | CUST_31058_PI390587928 | ABC08690 ABC14383 ABC34750 ABC49709 |
| AK374494 | 1004 | 1e-69 | 812 - 1004 | 91 | 182 / 199 | None | ABC04350 ABC08690 ABC14383 ABC34750 ABC43884 ABC49709 |
| MLOC_25421.1 | 176 | 4e-69 | 1 - 173 | 94 | 164 / 174 | None | ABC08690 ABC49709 |
| MLOC_76168.1 | 150 | 1e-64 | 1 - 147 | 97 | 143 / 147 | None | ABC08690 |
| MLOC_2155.1 | 232 | 9e-61 | 1 - 149 | 95 | 142 / 149 | CUST_31058_PI390587928 | ABC08690 ABC14383 ABC49709 |