barSeed - Barley Seed Development Database

Probe ABC14284

Source Contig ABC14284

barSeed

Links

Affymetrix Source Sequence (901 bp)

>ABC14284 901
GCATCGATCGGCTTGCAGCTGAGTACTTCACCACAACAAATCCACACTCGACTGCTAGTA
ATCTTCAAGCATCGCAGAGTTCAGGAAGACCAGTCAGGGGTATCGTCTCCTCCAACGCCC
GCGAGAAGAACAGAGGTACAGAGAGGGATCATGACGAGTGCGGCCAAGGCGTCGTGGATG
ATGGCAATGAGCCTGGGCGCTGTGGAGGCGCTCAAGGACCAGGCCGGCCTCTGCCGCTGG
AACTACGCCCTCAGGTCCATCCACCGTGCAGCCAAGGCCAAGGCCAACGTCCGCGGAGGC
GTCTCGCAGGGCGCCAAGCAGCTTCCGGCCTCTTCTGCGGCGGAGGCGGAGAAGCGGCGA
GCGAAGAAGGCCGAGGAAGGGCTGAGGACGGTCATGTACCTCAGCTGCTGGGGTCCCAAT
TAGTACTAGTTACCAAGAGGTGTTTTAGCCTCTGGTACAAACCTCTAGCAACAACGACGC
CCTGTGACTTGGCTGGTTGATTCCCTGCGGATTGTAAATACGTATCACGATGATGACGAC
GAAACCTTGCCCCGCTTCGAGTTCACATTATCGTGCTTTAGAAAAAGGTTTGCGTTGCCT
TTCAAACAAATCTGTTTGCTACGGATTCTTTACGAAGATTATTGCTCAAGTTGGTCACAA
GCTTTGCATGTTGCTCTCTTCTGTTCAATGGGCAGAGCAAGATCGGGACACACAAAATTG
ATCATGTCCATGAGTTTTCCGCCAGCTTGAACAGATGATAATCAATACTTATTTTTGTCG
AATTAGTTTCGTAGGTTCAGTTTTATAACCATATGAATATGATAAACAATACTTTTTTCT
GGCGAATTAGTTTCGTAGGTTCAGTTTTATAAACATATAATAGCAAAAAAAAAAAAAAAA
A

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_76721.1	766	9e-99	291 - 555	91	242 / 265	None	ABC03511 ABC03512 ABC03514 ABC03515 ABC05348 ABC11923 ABC14284 ABC17317
AK355456	574	7e-95	165 - 428	91	239 / 264	CUST_31806_PI390587928	ABC03512 ABC03514 ABC03515 ABC11923 ABC14284 ABC17317
MLOC_64888.1	739	1e-92	74 - 473	83	330 / 400	CUST_37382_PI390587928	ABC03511 ABC03512 ABC03514 ABC05348 ABC11923 ABC14284
AK376360	584	2e-90	168 - 432	89	237 / 265	CUST_25658_PI390587928	ABC03511 ABC03512 ABC03514 ABC03515 ABC05348 ABC11923 ABC14284 ABC17317
MLOC_59359.1	1933	8e-65	162 - 409	85	223 / 263	None	ABC14284 ABC17317
MLOC_26534.1	764	1e-63	331 - 603	83	239 / 288	CUST_32063_PI390587928	ABC05348 ABC11923 ABC14284
MLOC_15439.1	778	5e-62	191 - 457	83	231 / 278	CUST_31807_PI390587928	ABC03511 ABC03512 ABC05348 ABC14284