- Probe ABC13939
- Source Contig ABC13939
Affymetrix Source Sequence (981 bp)
>ABC13939 981 GAGATCGCCAATGACGGCACAGTTCCATTCAGGCATGGAGAGCGCATTGGCTTCAGTTAC CTAGTTTCACAGAAGTATACTGGTGAGAAGGCACGTGTCAAAGTTCTCCGGAGTTCAAAA ATTCATGAATTCAACATAAAGCTATCAATCCACAAAAAGCTCATTCCAGCTCATATAAAG GGCAGGCCACCGTCATACTACATTGTTGCAGGCTTTGTTTTTATGGTCGTATCTGTTCCA TATCTTCGATCCGAGTATGGAAAAGATTACGAATTTGATGCCCCCGTCAAGTTGTTGGAC AAGCATCTACATGCAATGGCGCAATCACCTGATGAGCAGCTTGTGGTGGTCTCACAGGTG CTTGTGGCAGATATCAATATTGGTTATGAAGAAATTGTCAATACTCAGGTGCGTGCGTTC AATGGGAAACCAGTAAATAATTTGAAGCAACTGGCGACAATGGTGGAAGATTGCAACAAG GAGTTCTTGAAATTTGACATGGATTACGACCAGGTTGTTGTTCTCGAGACAAAAACAGCA AGGGCTGCGACTCAGGACATTCTAACAACACACTGCATACCTTCAGCGATGTCAGATGAC CTGAAGGCCTGAGTGAAAGCACGGTGTTGGCCGATGCCACTATATCCGGCCATCCTATTG GCACGTACTTTGTGTTGGATTATACAACGCCAAGTGCACGAGCAACCCCTCTTCAGCAAT GAGTGCTGCTGAAGTTTTGGACGTGGAAGAGCATTATAGTTGGGCAAAAAAGTTGAATGG TGGCCAACATCGTATCCTCACTGTCTAGGTTAAAAAATGTGGCACCGAGCAACTGGGAAA CCTGTAGAATAGCAGCAATCGAAGTTATGTTCTCATTTGATTTATTGAATCAATACCAGA AAGGTACCCTTGCATTTGCGTATCCGTACCCGCATCGTCACGTTTGCCATGGTATATTCA CTTTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK359231 | 2129 | 0.0 | 1209 - 2129 | 99 | 920 / 921 | CUST_15278_PI390587928 CUST_29765_PI390587928 | ABC09517 ABC13939 ABC40320 |
| MLOC_36546.2 | 1692 | 0.0 | 78 - 963 | 99 | 885 / 886 | None | ABC09517 ABC13939 ABC40320 ABC49854 |
| MLOC_36546.8 | 1447 | 0.0 | 1 - 831 | 99 | 830 / 831 | None | ABC09517 ABC13939 ABC40320 ABC49854 |
| MLOC_36546.4 | 718 | 0.0 | 1 - 712 | 99 | 711 / 712 | None | ABC09517 ABC13939 ABC40320 |
| MLOC_36546.5 | 716 | 0.0 | 1 - 710 | 99 | 709 / 710 | None | ABC09517 ABC13939 ABC40320 |
| MLOC_36546.6 | 741 | 0.0 | 1 - 706 | 99 | 705 / 706 | None | ABC09517 ABC13939 ABC40320 |
| MLOC_36546.3 | 562 | 0.0 | 1 - 542 | 99 | 541 / 542 | None | ABC13939 ABC40320 |
| MLOC_36546.1 | 675 | 0.0 | 78 - 576 | 99 | 498 / 499 | None | ABC13939 ABC40320 |
| MLOC_36546.7 | 498 | 0.0 | 1 - 497 | 99 | 496 / 497 | None | ABC13939 ABC40320 |
| AK376772 | 2123 | 4e-152 | 1161 - 1764 | 83 | 502 / 606 | None | ABC09517 ABC13939 ABC49946 |
| MLOC_60140.1 | 1575 | 4e-152 | 681 - 1284 | 83 | 502 / 606 | None | ABC09517 ABC13939 ABC49946 |
| AK370623 | 2487 | 3e-114 | 1150 - 1553 | 85 | 345 / 405 | None | ABC09517 ABC13939 ABC49946 |