barSeed - Barley Seed Development Database

Probe ABC13470

Source Contig ABC13470

barSeed

Links

Affymetrix Source Sequence (963 bp)

>ABC13470 963
GCTCAATTTCTCCATTGCATATGGAAAAACAGCTGCTGGGCTTGCTCGGGATTGGAAGGT
ATCACGTAGGGAAGCAGAGGATACACTGGATCTCTGGTACAGTGACAGAAAAGAAGTTTT
GGCATGGCAGACGGAACAGAAAGAATTAGCATATGAGAAGTCTGAAGTTTATACTTTGCT
TGGACGCTCTCGCCGTTTCCCCAGCATTTCTTCTGTAACCTCCAAAACATGGAAGCACAT
CGAGCGTGCTGCTATCAATGCCCCTGTACAGGGCAGTGCAGCAGATGTTGCCATGTGTGC
AATGATTGAGATAGAAAGGAACACTCGTCTTAAGGAGCTCGGTTGGACCCTCCTGTTGCA
GGTGCATGATGAAGTGATACTCGAAGGACCTTCCGAGTCGGCTGACGTGGCCAAGGCAAT
AGTGGTTGAGTGCATGTCTAAGCCCTTCTACGGCACCAACATCCTGTCGGTCGACCTGGC
TGTTGATGCGAAATGTGCACAGAACTGGTTTGCGGCCAAGTAGACTCCGAGCATCATCAC
CCCCTCCGCCGACTCCCCAACAAGGCGTAGGTGCGCCCCAGATGCGCACATACTCCAGCC
AATTTTGGTCCGTCCTGAGCTGGTGTTAACTGCTGCATAATAGCACAGGGCATGCATAAG
GCTCATCCTGCCATGGCAGCAGAAAAGTGAGATTAGCAGCGAAGGCATTGTACACTACCA
TTTAGGCTGGATAGCTGGACTCCACACCCTTCCTAGTAGGCACTCTGAATCGAGCTAGAG
GGATTGTAGTTAAGATTGGCATGCATTTTGTGTATAAGATTGCTGCAGTGTGCTAATGCA
TTAGGTTAGATAACATATTCCCTGATGTGGACACGATCATGGGCTCATGGCGATATAACT
TTGTTCCGATCAATGGAGAAATGCAGTTCATGATGAGCTTTCCTCTAAAAAAAAAAAAAA
AAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_53533.1	5124	0.0	1433 - 2379	99	946 / 947	CUST_33622_PI390587928 CUST_22145_PI390587928 CUST_14192_PI390587928 CUST_19912_PI390587928 CUST_21475_PI390587928	ABC13470
MLOC_53533.2	3589	0.0	1 - 881	99	880 / 881	CUST_14192_PI390587928 CUST_22145_PI390587928	ABC13470
MLOC_53533.3	3575	0.0	1 - 826	100	826 / 826	CUST_22145_PI390587928 CUST_14192_PI390587928	ABC13470
MLOC_53533.4	3573	0.0	1 - 826	100	826 / 826	CUST_22145_PI390587928 CUST_14192_PI390587928	ABC13470
MLOC_53532.1	2715	8e-110	2456 - 2671	100	216 / 216	CUST_19912_PI390587928 CUST_21475_PI390587928 CUST_33622_PI390587928	ABC13470