barSeed - Barley Seed Development Database

Probe ABC13289

Source Contig ABC13289

barSeed

Links

Affymetrix Source Sequence (1769 bp)

>ABC13289 1769
GGTTTCGGAGGGCGGCAACGCAAACCCATCTCCCCCAAATCCATCCCGCGGGAGAACCAG
GCGGGCGGGCGGGCGAGCGAGAGAGGCCGGTGCCGGTGCCGGTGCGATGAGGATTGACGA
TCCACTCGACTTCGAGGGGGAGGACGACCCCCTCCTCACCGTCCGCCGCCCCGCCAAGAG
GAAGAAGGTTATTGGGTTGGATGATCTCTTACAAGATTACTTTGATTCCGGGAAGGATGA
GCTCAAAGCTTCTGCTGCTAAGTCTAAGGGTCGCCCCAAAGGAGACAATTCAGACGATGA
AGACAAGAAGATCAGGGAGAAGGAGATTGACTTCTGCAAATTTGTGGATGAGTGTGAGGA
AAAGGCGAAAGTGATGGATCCTGGAGAGGATGTACCCCAATGGGGACAGCGAGTTTTCGG
CTGTCAGAAATTACCCTCAATTCTTGGTGGCACGGGAGTTGAAAAATGCCAACTTTTGCA
ATCATTCGGTGGAGATGAGCAGTTAGGTTTTGATCTAGAAATTGAACAAGGAGAGGCCTT
TTTAGAAGGCATGCTGATGAATGGATGGCTTATGAAGTTGGTAGCCTTATATGGTTCTGT
TGAAGACTCTATAGCATCATGGGCGCTAACCGCATTGCTGTACTCATCCAATAAGAAGTT
ACAAGATTCTGCATCTGAATTTTGGGATAGTCTCCTTTCCCTAAATGAGGATGATAAACC
ATCCGTAAACTTTGGATACTTTCCAAGCTATTCTATTCTAAAGGATGCTGTACTTAATTA
TGGATACCTACATGATGCTCCTTGGTCTAAAACTTGCACCTCTGAAATCGCGGTTGCAGA
TGGCCCACCTCAAAACATCACCGCATGGTTAAGAGTTGTATCCGCTTGCTGCAAAATTAG
AAAACTGCATTCTGTCTTTTCACCTTCGGAAGCAGAAGATGTCCTTGTTATTGTTATTTC
CCTCTTTTTGGACCGTCGACTTGAAGGGCTGCCACTTATTTTGGGAGATTGCCTGAATTC
ACTCATCTCGTACTTCAATACGAGTGAATGGGAAAGTAGCTGTCTGATGGTTGCTGAGTC
GATTTCTAAGAGGGTCAACATGGATCTTAATTGTCTAAGGATTGTTGACTGCATTACCGG
AACCAACGACCGTAGCAAATTCCTAAGGAGCCAGCTGGCCCTTCAGTTGCTCAAAAATAG
CTTCGGCCTTAAAGTGGTGAATGTTGAAAGGATCCTGAAGTCAGTCACATCGATAAATGT
GAAGGAGAAAGAATGCAGCTTCTTCATGCTGTACGTGCACATAGTCTTGATGGACAACCT
GCTCTTCTCGAGCGACGCTTTCAGAAACAAGATCGCGATAATCGACGCTTGGCGCAATTT
TCTACGGAACTGTTCGACCCAGATAGGATGCACGGACTGGAGGTTCTACGCTTCCAAGGT
CCGAAACAAGGCGTCGTATCTCCTGCAAGGTGCAATGCTGAAAAGGCCTGCCGGCAGTGG
TAGCATTCCTGCCAACTGATTTGAACCAGCCTACTGAAGTGCTGCTGCTGGAGGGCACGG
AACCTAGACTCTGATTTACTGGCACAAGTGGTGTGTCAGGGTGAATTGTAGGCGCATTTT
GGGTAACTGATGGTGGCTGACAGTATTCTCAGCCCATGTATAGCAGTCCCCAGCACTGTC
AAGTCTCAACATAGAGAATGCCACTCAATGAACTTTTGCAGCATGAACTTCTACGTATTA
AATTAAATATACATTATGTAGATTTGCTA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_68655.1	2411	0.0	654 - 2411	99	1757 / 1768	CUST_10764_PI390587928	ABC13289
MLOC_68655.3	2291	6e-173	470 - 824	97	355 / 365	CUST_10764_PI390587928	ABC13289
MLOC_68655.2	2464	0.0	635 - 1259	98	625 / 635	CUST_10764_PI390587928	ABC13289
MLOC_68656.7	2470	1e-70	2250 - 2420	94	171 / 181	CUST_40481_PI390587928 CUST_26243_PI390587928	ABC13289 ABC24303
MLOC_68656.8	2487	1e-70	2276 - 2446	94	171 / 181	CUST_40481_PI390587928	ABC13289 ABC24303
MLOC_68656.9	2365	1e-70	2154 - 2324	94	171 / 181	CUST_40481_PI390587928	ABC13289 ABC24303
MLOC_68656.4	2366	1e-70	2193 - 2363	94	171 / 181	CUST_40481_PI390587928 CUST_26243_PI390587928	ABC13289 ABC24303
MLOC_68656.5	2747	1e-70	2574 - 2744	94	171 / 181	CUST_40481_PI390587928 CUST_26243_PI390587928	ABC13289 ABC24303
MLOC_68656.2	2752	1e-70	2253 - 2423	94	171 / 181	CUST_40481_PI390587928 CUST_26243_PI390587928	ABC13289 ABC24303