barSeed - Barley Seed Development Database

Probe ABC13164

Source Contig ABC13164

barSeed

Links

Affymetrix Source Sequence (926 bp)

>ABC13164 926
GGTCGGTGATGTAAATCCGTTGCAGATTACTTGTTCCTATTTCTTGGGGGAGTGAACTTA
CTAACTAAATTTCCTTCTTAATTAGTGCTTTTCATGGCAGGTTGATGATCAAGTCTGAGT
TATTTATGGTTTGCTCTCATATAGCGTATTTGTTTCAGTTAAATGTTTTCTTCTTTGCAG
GTTATGTTTCTAACATCTATATAAAATATATTGCTTCCTCCTGTTTTGTTTTGACCACCT
TCTTTCCTTTACTCCTTTCTGTTTTGCAGGGTTTAACCAGGTGCTAACTTTTTTGAAAAT
ATTTTGGTCTATATGTAATGTTCCCTTTGTTAAATTGATTTTTCTTGTTCTGAGTGTTAC
CTTGTTTTTTATGTTTGTGCAGGTGAATTGGTGTTCTTTCGCTCTTCTCGGTCCATGGGA
GGCAGGAGCTATGGAAGATCATTGAAATCCTTTGCAGCAGTGGGATAGCAAGGTACCATC
AAAGTCTTAGGCGGCAGAATGCTTTTCAGTGCATTGTCCACAACAGAAATCATCAGCAGA
AGAGAGGTTTGGAACTATTCAAACAAGAGCCAGCTTGAAGCCACTGAAACTTCAAAACTC
ATACTGGAGAAGAGCCTGCAGGGGCTTGACATCGCGTTGCTGCTGCGGTAGGACAAGTCT
ACTCCAGTACCTGCCACTGCGACCCGAAGTAAACCTCTGTGGATCTAGTTGAGTATCCAC
CATCTGTGATCCAAAGCAAGATCTGTGAAGATCTCAAGAGATTTCAGTGTCCCCAATCCA
ACAAGCTTGTTCTCAACATAAACTTAATATTGCCGTGCAATTTCCTTTCCCGTTCTAAAA
GAGATTAGGCCATGATTGTACATTGTAAGACAATTATATCAGGAGTAAAGGGAACTTTTC
TTCCGCGTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK369867	2758	0.0	1851 - 2758	99	907 / 908	CUST_40282_PI390587928 CUST_39930_PI390587928	ABC08336 ABC13164
AK367437	749	0.0	221 - 747	99	526 / 527	CUST_39930_PI390587928	ABC08336 ABC13164
MLOC_69612.2	874	0.0	118 - 528	99	410 / 411	CUST_39930_PI390587928	ABC13164
MLOC_69612.1	389	0.0	1 - 389	100	389 / 389	None	ABC13164
MLOC_49171.1	222	3e-113	1 - 222	100	222 / 222	None	ABC13164
MLOC_48483.1	146	3e-64	1 - 146	97	142 / 146	None	ABC13164