barSeed - Barley Seed Development Database

Probe ABC08336

Source Contig ABC08336

barSeed

Links

Affymetrix Source Sequence (842 bp)

>ABC08336 842
GAGGGAGAGGGAGAGGGAGAGGGAGAGGAAGGAGAGACCGAAGGCCGCCCGTGTTCTTAC
CCCGTCTCCTCTTCCGCCTTCGGCCTTTACTGAAACTCCCATCTCAGAAACCAAGAAAAG
GGGGTCTGTGAAGAGGTGTCTTGCGGCAGAACAATGGAGGTACTTGGCAAATCTGTGATT
GCTGAGCCCAGCAATGTGATTTTCTTGTCCACTATTCTTAACACAGAAGGGCAAGTCCCC
AGTCACAAGTGTGACAAGAGGTGCCAGAATGAGCACATCTTTGGAAACATGTACCGCTGC
AAACTGACTGGATTGACACACATCTGTGACAAAAACTGTAACCAGAGGATCCTCTATGAC
AACCACAACTCGCTCTGCCGAGTGAGTGGGCAGTTGTTCCCGCTCTCGCCACTGGAGCTG
CAGGCTGTGAGGGGGATTCGGAGGAAGCATGAAGCTGACAGCCATGAAGGGTGCTCCTTT
AAGCGCAGGCGTGGTGCACAGCTTCATCCTTCCCCTTTTGAGAGGTCCTACTCCGCCGTG
TCTCCGATACCGAGCCAAGCTGGAGATGGCATGGACCTGAGCTAGAGCTAACGAGACTTC
CATCTTTTCTTTTCCCGGCTACCTTATGCGGATCTCTACTCCATTTCCCCTTCTTTGACA
GGATGGAAACTATAAGAGCTTCCTTCTTTGTAGACTTATGAAGGGATATGAGACTCCTTT
AGAGGCACTAAATAATGTCTATGTAGTATAAATTCAGTTTCATGGGACCTTGTTGTAATC
GTAACTTCGATTGAACAGCCTATTCTGAATTACTTAGTGTTAATCAAAAAAAAAAAAAAA
AA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368192	867	0.0	59 - 867	99	804 / 809	CUST_40282_PI390587928	ABC08336
AK369867	2758	0.0	963 - 1697	99	734 / 735	CUST_40282_PI390587928 CUST_39930_PI390587928	ABC08336 ABC13164
MLOC_26465.1	283	4e-142	1 - 280	99	278 / 280	None	ABC08336
MLOC_41377.1	292	1e-137	1 - 266	100	266 / 266	CUST_40282_PI390587928	ABC08336
AK367437	749	3e-73	62 - 231	96	164 / 170	CUST_39930_PI390587928	ABC08336 ABC13164
MLOC_79020.1	355	9e-69	1 - 148	99	146 / 148	None	ABC08336