- Probe ABC12996
- Source Contig ABC12996
Affymetrix Source Sequence (1641 bp)
>ABC12996 1641 TGGTATCCTGGCGCGTTGCTGGTCCCCACTGAGCTGACTAAACCCTATTCTCTGCTATCA ATTCTGTTACCTCCCTCTGTGCGCCGCCCGGGTGTCATGGGTCAACCAAGCCAAAGCTTG CCGGAGGCCCAAACCTCTCCCTATCATTCATGGTGAATGGTGAGTATTGCATCATTGCCT GTTCAAGCATTAACAAGTACAATCAATGAGGAAAATCTACCGGATCTGAAGTACCAATTC GATACAATTGATGTTGATAAAGGTGGACCAATTACTGCATTGAAGAAATGCAGCAGTGGC CCTTGCGAAGGATCTTCACATTAAAGGCTCCTCATGTTCTCAAGATTATTCAGGTTTATT CGCCATTAAATTTCTACGAAGGGACTTGTCAATCCACCTTACGCCCGTACTAAAATAGAG TGTTTCTAGAGAGTAGAAACATTGCATGCAGAAATCTTCAAGAAAGAGGTGATTGAAGTG GTAATCGATGAAATGCCTGCTGGTGAAGCTATCATGGATCCAACTCACGACCTAATTGGC CACAAAGACCAAAGTCTCGGATTCCTGGAGCAACAAATGTAGTGTTGTCAGTCTCTGAAG ATGTGAATCCGTCTGCTCCTAGACTACAACAAAGGGATGATTGGGATACTGAAAGTCAGT ATACAGAGGCTTAGTGGAGTCAGACAGTCAGTCACCAACATCTTCATTGTTTAAACAGCA ACATCAAGTGGCGCCAAAACATGTGAGTTACTTTCATCTTTGGCATAACCAACCTTATTG GTGGACTTCCTCTGATTTTTCACAATGTAAAGAACTTCTCTCCTGGCTGAATTTTCAAAA TATTTTAGTGACCATTACAGAAAACTGGTATCCAAAACTCCAAAAACTAACATGTCATTT TCTTGTGGATAACATATCACTGATTTGCGAGACAACCGAGTCATGAATGATGACAAATGA GAAGTTCGACCACTACTCACTCAAGCTTGGAGGTGGTCGAAAGCCAGGCTCTACATGGTC CTAGCACCGCTCTCATGCATGGTGTTCAGGCTACTTCCACCAGTGCTCTGTGGGTTGTAG TTCCATGAGAGCTATGACAGGGAGAACGAGATGATGGACGTCGCCGGTGCTTCGCTCGCC TGCATCGCTCTGCTAGCGCTCGGGAAGGTTATGGCCACACAAGAGCCATGACATACTTCA AGACTCATTTACTACCTTACCATCGTCATGAGCTTGTCCGGGATGTCGTGCGTCGCTGGT GTACTGATCATGAGGCTTCTCGGACACTTTGGCACCATTGATCAAGGTTGTGCAACGGCT CCTCATGCTTCTCTAGCTGTTCTCTCATTTAGGTGATGCACATATGACTGCCTAGGCCTC ATTCTGAAGTCTTAAGTTCCTCGGAGCATTGATGGTATAAAAAGAAAAGACATGGTTGAG TTCAAGAGAAAGTGCAGAAAGTGCATGAAGAAACATCTGAATCTTTTTTGAGTTGCTACC TGATGTTTTGTTATACTTCTGGTGTACATTTTAAGTTACTATCATTTCATGTCAAAATGT GTGATCTTGGTCACTCAAGTCCGTCTGTATGGTGGAATATTACTATCAGGTATTTTATAG CAAGAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK353595 | 3131 | 0.0 | 1579 - 1934 | 99 | 352 / 356 | CUST_30318_PI390587928 | ABC02414 ABC12996 ABC31550 |
| MLOC_3306.1 | 687 | 0.0 | 1 - 687 | 98 | 670 / 687 | None | ABC12996 |
| MLOC_9253.1 | 665 | 0.0 | 1 - 665 | 97 | 653 / 675 | None | ABC12996 |
| MLOC_63520.1 | 559 | 0.0 | 1 - 559 | 99 | 553 / 559 | None | ABC12996 |
| MLOC_31233.2 | 654 | 2e-83 | 1 - 181 | 98 | 177 / 181 | None | ABC12996 |
| MLOC_31233.1 | 644 | 6e-88 | 1 - 189 | 98 | 185 / 189 | None | ABC12996 |
| MLOC_30942.1 | 439 | 0.0 | 1 - 358 | 99 | 356 / 358 | CUST_12121_PI390587928 | ABC12996 |
| MLOC_63520.2 | 356 | 3e-176 | 3 - 356 | 98 | 348 / 354 | None | ABC12996 |
| MLOC_3305.1 | 754 | 4e-164 | 408 - 754 | 97 | 336 / 347 | None | ABC12996 |
| MLOC_30738.1 | 779 | 1e-84 | 248 - 442 | 96 | 187 / 195 | None | ABC12996 |
| MLOC_74795.1 | 307 | 2e-158 | 1 - 307 | 99 | 306 / 307 | None | ABC12996 |
| MLOC_3305.2 | 388 | 3e-156 | 1 - 318 | 98 | 312 / 318 | None | ABC12996 |
| MLOC_3306.2 | 307 | 3e-145 | 9 - 306 | 98 | 292 / 298 | None | ABC12996 |
| MLOC_3305.4 | 702 | 8e-92 | 140 - 335 | 98 | 192 / 196 | None | ABC12996 |
| MLOC_30565.1 | 290 | 1e-140 | 7 - 290 | 99 | 280 / 284 | None | ABC12996 |
| MLOC_31234.1 | 247 | 2e-113 | 1 - 247 | 97 | 239 / 247 | None | ABC12996 |
| MLOC_50496.1 | 308 | 2e-93 | 1 - 187 | 100 | 187 / 187 | None | ABC12996 |
| MLOC_1881.1 | 369 | 6e-88 | 172 - 369 | 96 | 191 / 198 | None | ABC12996 |
| MLOC_42006.3 | 1131 | 5e-79 | 968 - 1131 | 99 | 163 / 164 | None | ABC12996 |
| MLOC_42006.2 | 247 | 8e-77 | 88 - 247 | 99 | 159 / 160 | None | ABC12996 |
| MLOC_42006.1 | 264 | 8e-77 | 105 - 264 | 99 | 159 / 160 | None | ABC12996 |
| MLOC_42006.4 | 756 | 1e-74 | 601 - 756 | 99 | 155 / 156 | None | ABC12996 |
| MLOC_72723.2 | 1169 | 6e-68 | 309 - 634 | 81 | 266 / 327 | None | ABC12996 ABC31550 |
| MLOC_72723.1 | 1251 | 6e-68 | 321 - 646 | 81 | 266 / 327 | None | ABC12996 ABC31550 |
| MLOC_1880.1 | 351 | 6e-68 | 196 - 351 | 97 | 151 / 156 | None | ABC12996 |
| AK249926.1 | 2779 | 3e-66 | 2143 - 2468 | 81 | 266 / 328 | None | ABC12996 ABC31550 |
| MLOC_47884.1 | 897 | 2e-62 | 752 - 897 | 97 | 141 / 146 | None | ABC12996 |
| MLOC_47883.1 | 712 | 3e-61 | 569 - 712 | 97 | 139 / 144 | None | ABC12996 |
| MLOC_30235.1 | 3171 | 3e-61 | 838 - 984 | 96 | 141 / 147 | CUST_5565_PI390587928 | ABC02414 ABC12996 |