barSeed - Barley Seed Development Database

Probe ABC31550

Source Contig ABC31550

barSeed

Links

Affymetrix Source Sequence (625 bp)

>ABC31550 625
GTCTACTTCCACCGGTCATCTACGGGTTGTCGTTCCGCGAGAGCAACGACAGGGAGAACA
AGATGATGGCCGTCGCCGGTGCTTCGCTCGCCTGCATCGCTCTGCTGGCACTCGGAAAGG
CGCATGTCAAGACGGCACCCAGGACATACTTCAAGACCCTCATGTACTACCTGACCATCG
CCGTGAGCTCGTCGGGGCTGTCGTACGTCGCCGGGGTGCTGATCACGCGGCTCCTGGAGC
ACTTTGGTGTGATCGAGCAAGGCGCGTCGGCTGCTCCTGCTCCTCCAGGCATGTCGTTCA
CTCATTCAGTGGGTGCTCAGACATCTGCATGGGCATCATTCTGAAGTCTGATGTCTGAAA
CTTTGAAGTTCATGGGAACACTCCTGCAAAAAAAGGAAGACATGTATGAGTAGTCCAAAG
AGCAAGTGCCTGAAGATATGCAGGGGGTGCAGCCTGAACATCTTCCTGCACATCAAGATG
GTAGAAACATACACAAAGTTGTACTACTAGGGTTGAGCCACTTATTTTGGGACGGAGGGT
GTACAATATAATTACAACAGATGTCTCCCTGAGCTTCGTATTTATTTTTCAGTAATTTAA
TATTCCGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249926.1	2779	0.0	2222 - 2779	100	558 / 558	None	ABC12996 ABC31550
MLOC_72723.1	1251	0.0	1 - 565	98	560 / 569	None	ABC12996 ABC31550
MLOC_72723.2	1169	0.0	1 - 553	99	549 / 557	None	ABC12996 ABC31550
MLOC_22120.1	848	1e-100	315 - 594	90	259 / 287	None	ABC31550
AK353595	3131	1e-51	2712 - 2953	82	202 / 246	CUST_30318_PI390587928	ABC02414 ABC12996 ABC31550